Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.73■■■□□ 2.51
PHACTR3Q96KR7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.73■■■□□ 2.51
PHACTR3Q96KR7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.73■■■□□ 2.51
PHACTR3Q96KR7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PHACTR3Q96KR7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PHACTR3Q96KR7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PHACTR3Q96KR7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
PHACTR3Q96KR7 SNX5-217ENST00000606557 1087 ntBASIC30.72■■■□□ 2.51
PHACTR3Q96KR7 AC010997.5-201ENST00000609182 354 ntBASIC30.72■■■□□ 2.51
PHACTR3Q96KR7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.72■■■□□ 2.51
PHACTR3Q96KR7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PHACTR3Q96KR7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PHACTR3Q96KR7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PHACTR3Q96KR7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PHACTR3Q96KR7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PHACTR3Q96KR7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.71■■■□□ 2.51
PHACTR3Q96KR7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PHACTR3Q96KR7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.7■■■□□ 2.51
PHACTR3Q96KR7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
PHACTR3Q96KR7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PHACTR3Q96KR7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.7■■■□□ 2.51
PHACTR3Q96KR7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PHACTR3Q96KR7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PHACTR3Q96KR7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC30.69■■■□□ 2.5
PHACTR3Q96KR7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PHACTR3Q96KR7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PHACTR3Q96KR7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
PHACTR3Q96KR7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.68■■■□□ 2.5
PHACTR3Q96KR7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.68■■■□□ 2.5
PHACTR3Q96KR7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.68■■■□□ 2.5
PHACTR3Q96KR7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
PHACTR3Q96KR7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PHACTR3Q96KR7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.67■■■□□ 2.5
PHACTR3Q96KR7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.67■■■□□ 2.5
PHACTR3Q96KR7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC30.67■■■□□ 2.5
PHACTR3Q96KR7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PHACTR3Q96KR7 AC022211.4-201ENST00000625094 2161 ntBASIC30.66■■■□□ 2.5
PHACTR3Q96KR7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
PHACTR3Q96KR7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PHACTR3Q96KR7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PHACTR3Q96KR7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
PHACTR3Q96KR7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PHACTR3Q96KR7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.65■■■□□ 2.5
PHACTR3Q96KR7 MTDHP2-201ENST00000601468 714 ntBASIC30.65■■■□□ 2.5
PHACTR3Q96KR7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.65■■■□□ 2.5
PHACTR3Q96KR7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PHACTR3Q96KR7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PHACTR3Q96KR7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PHACTR3Q96KR7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.64■■■□□ 2.5
PHACTR3Q96KR7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PHACTR3Q96KR7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PHACTR3Q96KR7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.64■■■□□ 2.5
PHACTR3Q96KR7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.64■■■□□ 2.5
PHACTR3Q96KR7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PHACTR3Q96KR7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.64■■■□□ 2.5
PHACTR3Q96KR7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
PHACTR3Q96KR7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PHACTR3Q96KR7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PHACTR3Q96KR7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.63■■■□□ 2.49
PHACTR3Q96KR7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PHACTR3Q96KR7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
PHACTR3Q96KR7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PHACTR3Q96KR7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PHACTR3Q96KR7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.62■■■□□ 2.49
PHACTR3Q96KR7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PHACTR3Q96KR7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PHACTR3Q96KR7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.62■■■□□ 2.49
PHACTR3Q96KR7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 MIR6724-1-201ENST00000616420 92 ntBASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 MIR6724-2-201ENST00000616483 92 ntBASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 MIR6724-4-201ENST00000617390 92 ntBASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 MIR6724-3-201ENST00000622482 92 ntBASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 AC131274.2-201ENST00000580697 1507 ntBASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PHACTR3Q96KR7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.6■■■□□ 2.49
PHACTR3Q96KR7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
PHACTR3Q96KR7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PHACTR3Q96KR7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.6■■■□□ 2.49
PHACTR3Q96KR7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.6■■■□□ 2.49
PHACTR3Q96KR7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.6■■■□□ 2.49
PHACTR3Q96KR7 AL117332.1-201ENST00000622628 974 ntBASIC30.6■■■□□ 2.49
PHACTR3Q96KR7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
PHACTR3Q96KR7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.58■■■□□ 2.49
PHACTR3Q96KR7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.58■■■□□ 2.49
PHACTR3Q96KR7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.58■■■□□ 2.49
PHACTR3Q96KR7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PHACTR3Q96KR7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.58■■■□□ 2.49
PHACTR3Q96KR7 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.58■■■□□ 2.49
PHACTR3Q96KR7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms