Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPG11Q96JI7 MIR4767-201ENST00000582827 78 ntBASIC19.88■□□□□ 0.77
SPG11Q96JI7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.88■□□□□ 0.77
SPG11Q96JI7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.87■□□□□ 0.77
SPG11Q96JI7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.87■□□□□ 0.77
SPG11Q96JI7 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.87■□□□□ 0.77
SPG11Q96JI7 FOXO3B-201ENST00000395675 1928 ntBASIC19.87■□□□□ 0.77
SPG11Q96JI7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SPG11Q96JI7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPG11Q96JI7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SPG11Q96JI7 IKBKGP1-201ENST00000612193 1073 ntBASIC19.87■□□□□ 0.77
SPG11Q96JI7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPG11Q96JI7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.86■□□□□ 0.77
SPG11Q96JI7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPG11Q96JI7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPG11Q96JI7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPG11Q96JI7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPG11Q96JI7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.86■□□□□ 0.77
SPG11Q96JI7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.86■□□□□ 0.77
SPG11Q96JI7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SPG11Q96JI7 AC008764.7-201ENST00000593779 1081 ntBASIC19.86■□□□□ 0.77
SPG11Q96JI7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SPG11Q96JI7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.86■□□□□ 0.77
SPG11Q96JI7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.85■□□□□ 0.77
SPG11Q96JI7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPG11Q96JI7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPG11Q96JI7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPG11Q96JI7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.85■□□□□ 0.77
SPG11Q96JI7 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.85■□□□□ 0.77
SPG11Q96JI7 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.85■□□□□ 0.77
SPG11Q96JI7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPG11Q96JI7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPG11Q96JI7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPG11Q96JI7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPG11Q96JI7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SPG11Q96JI7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPG11Q96JI7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.84■□□□□ 0.77
SPG11Q96JI7 AC090877.2-201ENST00000558441 1738 ntBASIC19.84■□□□□ 0.77
SPG11Q96JI7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.84■□□□□ 0.77
SPG11Q96JI7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.84■□□□□ 0.77
SPG11Q96JI7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.84■□□□□ 0.77
SPG11Q96JI7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.83■□□□□ 0.77
SPG11Q96JI7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.83■□□□□ 0.77
SPG11Q96JI7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.83■□□□□ 0.77
SPG11Q96JI7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.83■□□□□ 0.77
SPG11Q96JI7 AC011298.3-201ENST00000615796 283 ntBASIC19.83■□□□□ 0.77
SPG11Q96JI7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPG11Q96JI7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SPG11Q96JI7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.83■□□□□ 0.76
SPG11Q96JI7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPG11Q96JI7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPG11Q96JI7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SPG11Q96JI7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPG11Q96JI7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.82■□□□□ 0.76
SPG11Q96JI7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.82■□□□□ 0.76
SPG11Q96JI7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPG11Q96JI7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.82■□□□□ 0.76
SPG11Q96JI7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPG11Q96JI7 AL138724.1-201ENST00000606771 1088 ntBASIC19.82■□□□□ 0.76
SPG11Q96JI7 AC092437.1-201ENST00000624794 1048 ntBASIC19.82■□□□□ 0.76
SPG11Q96JI7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SPG11Q96JI7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPG11Q96JI7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPG11Q96JI7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPG11Q96JI7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
SPG11Q96JI7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.81■□□□□ 0.76
SPG11Q96JI7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPG11Q96JI7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPG11Q96JI7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPG11Q96JI7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPG11Q96JI7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPG11Q96JI7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.8■□□□□ 0.76
SPG11Q96JI7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPG11Q96JI7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPG11Q96JI7 ID1-201ENST00000376105 1233 ntBASIC19.8■□□□□ 0.76
SPG11Q96JI7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPG11Q96JI7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPG11Q96JI7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPG11Q96JI7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.8■□□□□ 0.76
SPG11Q96JI7 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.8■□□□□ 0.76
SPG11Q96JI7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.8■□□□□ 0.76
SPG11Q96JI7 AC027682.1-201ENST00000562846 899 ntBASIC19.8■□□□□ 0.76
SPG11Q96JI7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.8■□□□□ 0.76
SPG11Q96JI7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPG11Q96JI7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPG11Q96JI7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPG11Q96JI7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPG11Q96JI7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPG11Q96JI7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPG11Q96JI7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SPG11Q96JI7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SPG11Q96JI7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPG11Q96JI7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.78■□□□□ 0.76
SPG11Q96JI7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.78■□□□□ 0.76
SPG11Q96JI7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.78■□□□□ 0.76
SPG11Q96JI7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPG11Q96JI7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SPG11Q96JI7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SPG11Q96JI7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.77■□□□□ 0.76
SPG11Q96JI7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms