Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SLC47A1Q96FL8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 C9orf163-202ENST00000624034 2573 ntBASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 GPX1-201ENST00000419349 1106 ntBASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC47A1Q96FL8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC47A1Q96FL8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC47A1Q96FL8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC47A1Q96FL8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC47A1Q96FL8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC47A1Q96FL8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC47A1Q96FL8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SLC47A1Q96FL8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC47A1Q96FL8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SLC47A1Q96FL8 AC093536.1-201ENST00000569153 554 ntBASIC21.77■■□□□ 1.08
SLC47A1Q96FL8 AC007029.1-201ENST00000604183 313 ntBASIC21.77■■□□□ 1.08
SLC47A1Q96FL8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC47A1Q96FL8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC47A1Q96FL8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SLC47A1Q96FL8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.77■■□□□ 1.07
SLC47A1Q96FL8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.77■■□□□ 1.07
SLC47A1Q96FL8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
SLC47A1Q96FL8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC47A1Q96FL8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC47A1Q96FL8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC47A1Q96FL8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SLC47A1Q96FL8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC47A1Q96FL8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC47A1Q96FL8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC47A1Q96FL8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC47A1Q96FL8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC47A1Q96FL8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SLC47A1Q96FL8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SLC47A1Q96FL8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SLC47A1Q96FL8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC47A1Q96FL8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC47A1Q96FL8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC47A1Q96FL8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC47A1Q96FL8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC47A1Q96FL8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.72■■□□□ 1.07
SLC47A1Q96FL8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
SLC47A1Q96FL8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC47A1Q96FL8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms