Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RFFLQ8WZ73 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.63■■□□□ 1.53
RFFLQ8WZ73 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RFFLQ8WZ73 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RFFLQ8WZ73 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RFFLQ8WZ73 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RFFLQ8WZ73 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RFFLQ8WZ73 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RFFLQ8WZ73 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.62■■□□□ 1.53
RFFLQ8WZ73 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RFFLQ8WZ73 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RFFLQ8WZ73 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RFFLQ8WZ73 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.61■■□□□ 1.53
RFFLQ8WZ73 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFFLQ8WZ73 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFFLQ8WZ73 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFFLQ8WZ73 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.61■■□□□ 1.53
RFFLQ8WZ73 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFFLQ8WZ73 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RFFLQ8WZ73 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFFLQ8WZ73 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFFLQ8WZ73 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RFFLQ8WZ73 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RFFLQ8WZ73 TSPY13P-201ENST00000338964 914 ntBASIC24.6■■□□□ 1.53
RFFLQ8WZ73 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RFFLQ8WZ73 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.6■■□□□ 1.53
RFFLQ8WZ73 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RFFLQ8WZ73 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RFFLQ8WZ73 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.59■■□□□ 1.53
RFFLQ8WZ73 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RFFLQ8WZ73 RPS2P7-201ENST00000447334 885 ntBASIC24.59■■□□□ 1.53
RFFLQ8WZ73 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.59■■□□□ 1.53
RFFLQ8WZ73 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
RFFLQ8WZ73 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RFFLQ8WZ73 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
RFFLQ8WZ73 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RFFLQ8WZ73 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.58■■□□□ 1.53
RFFLQ8WZ73 KRT18P60-201ENST00000312876 1297 ntBASIC24.58■■□□□ 1.53
RFFLQ8WZ73 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.58■■□□□ 1.53
RFFLQ8WZ73 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RFFLQ8WZ73 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
RFFLQ8WZ73 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RFFLQ8WZ73 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.56■■□□□ 1.52
RFFLQ8WZ73 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.56■■□□□ 1.52
RFFLQ8WZ73 DUSP8P5-201ENST00000422884 1815 ntBASIC24.56■■□□□ 1.52
RFFLQ8WZ73 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RFFLQ8WZ73 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.56■■□□□ 1.52
RFFLQ8WZ73 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RFFLQ8WZ73 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RFFLQ8WZ73 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.56■■□□□ 1.52
RFFLQ8WZ73 SPCS2P3-201ENST00000500401 656 ntBASIC24.56■■□□□ 1.52
RFFLQ8WZ73 AL592293.1-201ENST00000502889 1188 ntBASIC24.56■■□□□ 1.52
RFFLQ8WZ73 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.55■■□□□ 1.52
RFFLQ8WZ73 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFFLQ8WZ73 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RFFLQ8WZ73 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFFLQ8WZ73 AC004987.1-201ENST00000428627 508 ntBASIC24.55■■□□□ 1.52
RFFLQ8WZ73 ATP5G2P3-201ENST00000429083 425 ntBASIC24.55■■□□□ 1.52
RFFLQ8WZ73 AC018755.3-202ENST00000596210 929 ntBASIC24.55■■□□□ 1.52
RFFLQ8WZ73 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RFFLQ8WZ73 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFFLQ8WZ73 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RFFLQ8WZ73 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.54■■□□□ 1.52
RFFLQ8WZ73 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
RFFLQ8WZ73 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.53■■□□□ 1.52
RFFLQ8WZ73 AC133561.1-201ENST00000568600 2415 ntBASIC24.53■■□□□ 1.52
RFFLQ8WZ73 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.53■■□□□ 1.52
RFFLQ8WZ73 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RFFLQ8WZ73 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RFFLQ8WZ73 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RFFLQ8WZ73 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RFFLQ8WZ73 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms