Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD6Q8TD26 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD6Q8TD26 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD6Q8TD26 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
CHD6Q8TD26 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD6Q8TD26 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHD6Q8TD26 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD6Q8TD26 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHD6Q8TD26 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CHD6Q8TD26 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD6Q8TD26 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD6Q8TD26 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD6Q8TD26 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHD6Q8TD26 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CHD6Q8TD26 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD6Q8TD26 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CHD6Q8TD26 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD6Q8TD26 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHD6Q8TD26 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.57■■□□□ 1.04
CHD6Q8TD26 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.57■■□□□ 1.04
CHD6Q8TD26 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CHD6Q8TD26 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CHD6Q8TD26 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD6Q8TD26 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.56■■□□□ 1.04
CHD6Q8TD26 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHD6Q8TD26 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.56■■□□□ 1.04
CHD6Q8TD26 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.56■■□□□ 1.04
CHD6Q8TD26 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CHD6Q8TD26 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.56■■□□□ 1.04
CHD6Q8TD26 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD6Q8TD26 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHD6Q8TD26 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CHD6Q8TD26 KRT18P6-201ENST00000555540 1265 ntBASIC21.56■■□□□ 1.04
CHD6Q8TD26 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHD6Q8TD26 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CHD6Q8TD26 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.55■■□□□ 1.04
CHD6Q8TD26 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD6Q8TD26 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.55■■□□□ 1.04
CHD6Q8TD26 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHD6Q8TD26 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.55■■□□□ 1.04
CHD6Q8TD26 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD6Q8TD26 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD6Q8TD26 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD6Q8TD26 AC087239.1-201ENST00000622671 572 ntBASIC21.54■■□□□ 1.04
CHD6Q8TD26 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD6Q8TD26 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.53■■□□□ 1.04
CHD6Q8TD26 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.53■■□□□ 1.04
CHD6Q8TD26 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.53■■□□□ 1.04
CHD6Q8TD26 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD6Q8TD26 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.53■■□□□ 1.04
CHD6Q8TD26 AC136469.2-201ENST00000623944 1028 ntBASIC21.53■■□□□ 1.04
CHD6Q8TD26 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD6Q8TD26 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD6Q8TD26 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD6Q8TD26 AC006970.2-201ENST00000450065 779 ntBASIC21.52■■□□□ 1.04
CHD6Q8TD26 KRT18P14-201ENST00000534205 1250 ntBASIC21.52■■□□□ 1.04
CHD6Q8TD26 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD6Q8TD26 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD6Q8TD26 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.52■■□□□ 1.04
CHD6Q8TD26 MIR6722-201ENST00000617286 78 ntBASIC21.52■■□□□ 1.04
CHD6Q8TD26 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.52■■□□□ 1.03
CHD6Q8TD26 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD6Q8TD26 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.51■■□□□ 1.03
CHD6Q8TD26 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.51■■□□□ 1.03
CHD6Q8TD26 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.51■■□□□ 1.03
CHD6Q8TD26 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD6Q8TD26 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.51■■□□□ 1.03
CHD6Q8TD26 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD6Q8TD26 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD6Q8TD26 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD6Q8TD26 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.5■■□□□ 1.03
CHD6Q8TD26 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CHD6Q8TD26 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD6Q8TD26 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD6Q8TD26 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD6Q8TD26 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD6Q8TD26 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 PRORSD1P-201ENST00000295112 541 ntBASIC21.49■■□□□ 1.03
CHD6Q8TD26 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD6Q8TD26 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CHD6Q8TD26 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHD6Q8TD26 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD6Q8TD26 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.48■■□□□ 1.03
CHD6Q8TD26 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD6Q8TD26 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD6Q8TD26 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CHD6Q8TD26 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD6Q8TD26 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.47■■□□□ 1.03
CHD6Q8TD26 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.47■■□□□ 1.03
CHD6Q8TD26 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHD6Q8TD26 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHD6Q8TD26 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHD6Q8TD26 AC005703.6-201ENST00000623265 1329 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms