Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDH19Q8TAB3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH19Q8TAB3 BHLHE23-202ENST00000612929 1109 ntBASIC24.05■■□□□ 1.44
PCDH19Q8TAB3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDH19Q8TAB3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDH19Q8TAB3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH19Q8TAB3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH19Q8TAB3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH19Q8TAB3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.03■■□□□ 1.44
PCDH19Q8TAB3 AC004812.2-201ENST00000611079 2094 ntBASIC24.03■■□□□ 1.44
PCDH19Q8TAB3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH19Q8TAB3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH19Q8TAB3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDH19Q8TAB3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH19Q8TAB3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH19Q8TAB3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
PCDH19Q8TAB3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH19Q8TAB3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PCDH19Q8TAB3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDH19Q8TAB3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH19Q8TAB3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH19Q8TAB3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDH19Q8TAB3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH19Q8TAB3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDH19Q8TAB3 AC010980.1-201ENST00000587192 1142 ntBASIC24.01■■□□□ 1.43
PCDH19Q8TAB3 AC074183.2-201ENST00000623112 922 ntBASIC24.01■■□□□ 1.43
PCDH19Q8TAB3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH19Q8TAB3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH19Q8TAB3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDH19Q8TAB3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24■■□□□ 1.43
PCDH19Q8TAB3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDH19Q8TAB3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDH19Q8TAB3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDH19Q8TAB3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH19Q8TAB3 AC022616.5-201ENST00000518796 181 ntBASIC23.99■■□□□ 1.43
PCDH19Q8TAB3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDH19Q8TAB3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDH19Q8TAB3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
PCDH19Q8TAB3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH19Q8TAB3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
PCDH19Q8TAB3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDH19Q8TAB3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDH19Q8TAB3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH19Q8TAB3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH19Q8TAB3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH19Q8TAB3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH19Q8TAB3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDH19Q8TAB3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH19Q8TAB3 AC011551.1-201ENST00000614101 683 ntBASIC23.96■■□□□ 1.43
PCDH19Q8TAB3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH19Q8TAB3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDH19Q8TAB3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH19Q8TAB3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PCDH19Q8TAB3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.95■■□□□ 1.42
PCDH19Q8TAB3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDH19Q8TAB3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.94■■□□□ 1.42
PCDH19Q8TAB3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH19Q8TAB3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDH19Q8TAB3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PCDH19Q8TAB3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDH19Q8TAB3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PCDH19Q8TAB3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH19Q8TAB3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.93■■□□□ 1.42
PCDH19Q8TAB3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
PCDH19Q8TAB3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH19Q8TAB3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH19Q8TAB3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PCDH19Q8TAB3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
PCDH19Q8TAB3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH19Q8TAB3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDH19Q8TAB3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDH19Q8TAB3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH19Q8TAB3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDH19Q8TAB3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH19Q8TAB3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH19Q8TAB3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PCDH19Q8TAB3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH19Q8TAB3 ABCB10P4-201ENST00000566803 2184 ntBASIC23.91■■□□□ 1.42
PCDH19Q8TAB3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH19Q8TAB3 AC120024.1-201ENST00000562672 995 ntBASIC23.91■■□□□ 1.42
PCDH19Q8TAB3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms