Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RNF149Q8NC42 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.61■■□□□ 1.69
RNF149Q8NC42 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.61■■□□□ 1.69
RNF149Q8NC42 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
RNF149Q8NC42 MTDHP2-201ENST00000601468 714 ntBASIC25.61■■□□□ 1.69
RNF149Q8NC42 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.61■■□□□ 1.69
RNF149Q8NC42 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.61■■□□□ 1.69
RNF149Q8NC42 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF149Q8NC42 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF149Q8NC42 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF149Q8NC42 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF149Q8NC42 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF149Q8NC42 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF149Q8NC42 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF149Q8NC42 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF149Q8NC42 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF149Q8NC42 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RNF149Q8NC42 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RNF149Q8NC42 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.59■■□□□ 1.69
RNF149Q8NC42 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF149Q8NC42 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RNF149Q8NC42 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.59■■□□□ 1.69
RNF149Q8NC42 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF149Q8NC42 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RNF149Q8NC42 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
RNF149Q8NC42 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF149Q8NC42 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF149Q8NC42 SNX5-217ENST00000606557 1087 ntBASIC25.57■■□□□ 1.68
RNF149Q8NC42 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF149Q8NC42 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF149Q8NC42 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF149Q8NC42 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF149Q8NC42 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.56■■□□□ 1.68
RNF149Q8NC42 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF149Q8NC42 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF149Q8NC42 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF149Q8NC42 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.55■■□□□ 1.68
RNF149Q8NC42 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF149Q8NC42 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF149Q8NC42 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF149Q8NC42 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF149Q8NC42 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
RNF149Q8NC42 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
RNF149Q8NC42 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF149Q8NC42 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
RNF149Q8NC42 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.54■■□□□ 1.68
RNF149Q8NC42 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF149Q8NC42 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF149Q8NC42 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF149Q8NC42 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF149Q8NC42 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF149Q8NC42 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
RNF149Q8NC42 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF149Q8NC42 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF149Q8NC42 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF149Q8NC42 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF149Q8NC42 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF149Q8NC42 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF149Q8NC42 AC022211.4-201ENST00000625094 2161 ntBASIC25.53■■□□□ 1.68
RNF149Q8NC42 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF149Q8NC42 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF149Q8NC42 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF149Q8NC42 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF149Q8NC42 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF149Q8NC42 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF149Q8NC42 MIR6724-1-201ENST00000616420 92 ntBASIC25.52■■□□□ 1.68
RNF149Q8NC42 MIR6724-2-201ENST00000616483 92 ntBASIC25.52■■□□□ 1.68
RNF149Q8NC42 MIR6724-4-201ENST00000617390 92 ntBASIC25.52■■□□□ 1.68
RNF149Q8NC42 MIR6724-3-201ENST00000622482 92 ntBASIC25.52■■□□□ 1.68
RNF149Q8NC42 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
RNF149Q8NC42 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF149Q8NC42 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.52■■□□□ 1.68
RNF149Q8NC42 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF149Q8NC42 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
RNF149Q8NC42 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF149Q8NC42 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF149Q8NC42 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF149Q8NC42 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF149Q8NC42 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.51■■□□□ 1.67
RNF149Q8NC42 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
RNF149Q8NC42 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.5■■□□□ 1.67
RNF149Q8NC42 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.5■■□□□ 1.67
RNF149Q8NC42 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF149Q8NC42 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF149Q8NC42 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF149Q8NC42 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.49■■□□□ 1.67
RNF149Q8NC42 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.49■■□□□ 1.67
RNF149Q8NC42 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.49■■□□□ 1.67
RNF149Q8NC42 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.49■■□□□ 1.67
RNF149Q8NC42 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF149Q8NC42 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF149Q8NC42 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF149Q8NC42 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF149Q8NC42 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF149Q8NC42 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RNF149Q8NC42 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF149Q8NC42 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF149Q8NC42 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF149Q8NC42 MIR6722-201ENST00000617286 78 ntBASIC25.48■■□□□ 1.67
RNF149Q8NC42 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms