Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CHD1LQ86WJ1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
CHD1LQ86WJ1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 DUX4L18-201ENST00000553347 1267 ntBASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CHD1LQ86WJ1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CHD1LQ86WJ1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
CHD1LQ86WJ1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1LQ86WJ1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1LQ86WJ1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1LQ86WJ1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.72■■■□□ 2.19
CHD1LQ86WJ1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.72■■■□□ 2.19
CHD1LQ86WJ1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CHD1LQ86WJ1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHD1LQ86WJ1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CHD1LQ86WJ1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHD1LQ86WJ1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.7■■■□□ 2.19
CHD1LQ86WJ1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1LQ86WJ1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1LQ86WJ1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1LQ86WJ1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.7■■■□□ 2.19
CHD1LQ86WJ1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1LQ86WJ1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1LQ86WJ1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CHD1LQ86WJ1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
CHD1LQ86WJ1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
CHD1LQ86WJ1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHD1LQ86WJ1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1LQ86WJ1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1LQ86WJ1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.68■■■□□ 2.18
CHD1LQ86WJ1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1LQ86WJ1 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.68■■■□□ 2.18
CHD1LQ86WJ1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1LQ86WJ1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHD1LQ86WJ1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 AC019171.1-201ENST00000601251 1056 ntBASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHD1LQ86WJ1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHD1LQ86WJ1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC28.66■■■□□ 2.18
CHD1LQ86WJ1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHD1LQ86WJ1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CHD1LQ86WJ1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.66■■■□□ 2.18
CHD1LQ86WJ1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHD1LQ86WJ1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHD1LQ86WJ1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.65■■■□□ 2.18
CHD1LQ86WJ1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1LQ86WJ1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1LQ86WJ1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
CHD1LQ86WJ1 AC004987.1-201ENST00000428627 508 ntBASIC28.65■■■□□ 2.18
CHD1LQ86WJ1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.65■■■□□ 2.18
CHD1LQ86WJ1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1LQ86WJ1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHD1LQ86WJ1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CHD1LQ86WJ1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHD1LQ86WJ1 ATP5G2P3-201ENST00000429083 425 ntBASIC28.64■■■□□ 2.18
CHD1LQ86WJ1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
CHD1LQ86WJ1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHD1LQ86WJ1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
CHD1LQ86WJ1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1LQ86WJ1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1LQ86WJ1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1LQ86WJ1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1LQ86WJ1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHD1LQ86WJ1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1LQ86WJ1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.62■■■□□ 2.17
CHD1LQ86WJ1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHD1LQ86WJ1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms