Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF44Q7L0R7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RNF44Q7L0R7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF44Q7L0R7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF44Q7L0R7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF44Q7L0R7 GUSBP5-201ENST00000418136 578 ntBASIC22.25■■□□□ 1.15
RNF44Q7L0R7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF44Q7L0R7 AC142381.3-201ENST00000568208 1670 ntBASIC22.25■■□□□ 1.15
RNF44Q7L0R7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF44Q7L0R7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF44Q7L0R7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF44Q7L0R7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 MIR4787-201ENST00000607364 84 ntBASIC22.23■■□□□ 1.15
RNF44Q7L0R7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF44Q7L0R7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF44Q7L0R7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF44Q7L0R7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF44Q7L0R7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF44Q7L0R7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RNF44Q7L0R7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF44Q7L0R7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF44Q7L0R7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.15
RNF44Q7L0R7 AP003733.4-201ENST00000623785 1697 ntBASIC22.2■■□□□ 1.15
RNF44Q7L0R7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF44Q7L0R7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF44Q7L0R7 AC138932.3-201ENST00000567634 1902 ntBASIC22.18■■□□□ 1.14
RNF44Q7L0R7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF44Q7L0R7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF44Q7L0R7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF44Q7L0R7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF44Q7L0R7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF44Q7L0R7 AC092028.1-203ENST00000608262 953 ntBASIC22.18■■□□□ 1.14
RNF44Q7L0R7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF44Q7L0R7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF44Q7L0R7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF44Q7L0R7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF44Q7L0R7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RNF44Q7L0R7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF44Q7L0R7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms