Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCHD4Q6ZW05 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.24■□□□□ 0.99
PTCHD4Q6ZW05 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCHD4Q6ZW05 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCHD4Q6ZW05 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 AC093536.1-201ENST00000569153 554 ntBASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 MIR4449-201ENST00000578365 66 ntBASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCHD4Q6ZW05 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.22■□□□□ 0.99
PTCHD4Q6ZW05 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTCHD4Q6ZW05 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
PTCHD4Q6ZW05 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 C9orf163-202ENST00000624034 2573 ntBASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 AC007029.1-201ENST00000604183 313 ntBASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PTCHD4Q6ZW05 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTCHD4Q6ZW05 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PTCHD4Q6ZW05 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 GPX1-201ENST00000419349 1106 ntBASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTCHD4Q6ZW05 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 HLA-L-211ENST00000482052 1765 ntBASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTCHD4Q6ZW05 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTCHD4Q6ZW05 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms