Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.45■■□□□ 1.5
SYCE2Q6PIF2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.45■■□□□ 1.5
SYCE2Q6PIF2 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.45■■□□□ 1.5
SYCE2Q6PIF2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 AC091305.1-201ENST00000479476 895 ntBASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SYCE2Q6PIF2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SYCE2Q6PIF2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.43■■□□□ 1.5
SYCE2Q6PIF2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.43■■□□□ 1.5
SYCE2Q6PIF2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.43■■□□□ 1.5
SYCE2Q6PIF2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SYCE2Q6PIF2 AC087623.3-201ENST00000607047 1098 ntBASIC24.43■■□□□ 1.5
SYCE2Q6PIF2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.43■■□□□ 1.5
SYCE2Q6PIF2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SYCE2Q6PIF2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.42■■□□□ 1.5
SYCE2Q6PIF2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.42■■□□□ 1.5
SYCE2Q6PIF2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
SYCE2Q6PIF2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SYCE2Q6PIF2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SYCE2Q6PIF2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SYCE2Q6PIF2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 MIR4767-201ENST00000582827 78 ntBASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 SYT6-210ENST00000641643 1587 ntBASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SYCE2Q6PIF2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SYCE2Q6PIF2 AL162430.1-201ENST00000480705 870 ntBASIC24.39■■□□□ 1.49
SYCE2Q6PIF2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SYCE2Q6PIF2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SYCE2Q6PIF2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 AC005703.6-201ENST00000623265 1329 ntBASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 CA15P2-201ENST00000611168 834 ntBASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SYCE2Q6PIF2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.37■■□□□ 1.49
SYCE2Q6PIF2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SYCE2Q6PIF2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SYCE2Q6PIF2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SYCE2Q6PIF2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SYCE2Q6PIF2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.37■■□□□ 1.49
SYCE2Q6PIF2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.36■■□□□ 1.49
SYCE2Q6PIF2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SYCE2Q6PIF2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.36■■□□□ 1.49
SYCE2Q6PIF2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SYCE2Q6PIF2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.36■■□□□ 1.49
SYCE2Q6PIF2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SYCE2Q6PIF2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
SYCE2Q6PIF2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SYCE2Q6PIF2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SYCE2Q6PIF2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SYCE2Q6PIF2 RASA4CP-201ENST00000424092 1398 ntBASIC24.35■■□□□ 1.49
SYCE2Q6PIF2 SERBP1P1-201ENST00000396021 1160 ntBASIC24.35■■□□□ 1.49
SYCE2Q6PIF2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SYCE2Q6PIF2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.35■■□□□ 1.49
SYCE2Q6PIF2 AC096887.2-201ENST00000623443 1957 ntBASIC24.34■■□□□ 1.49
SYCE2Q6PIF2 AC097639.1-201ENST00000565519 1891 ntBASIC24.34■■□□□ 1.49
SYCE2Q6PIF2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SYCE2Q6PIF2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SYCE2Q6PIF2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SYCE2Q6PIF2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
SYCE2Q6PIF2 AC142086.6-201ENST00000621154 1765 ntBASIC24.34■■□□□ 1.49
SYCE2Q6PIF2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SYCE2Q6PIF2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SYCE2Q6PIF2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.33■■□□□ 1.49
SYCE2Q6PIF2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
SYCE2Q6PIF2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SYCE2Q6PIF2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.33■■□□□ 1.49
SYCE2Q6PIF2 AC092171.4-201ENST00000609130 632 ntBASIC24.33■■□□□ 1.49
SYCE2Q6PIF2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
SYCE2Q6PIF2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SYCE2Q6PIF2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.32■■□□□ 1.48
SYCE2Q6PIF2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SYCE2Q6PIF2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.32■■□□□ 1.48
SYCE2Q6PIF2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.32■■□□□ 1.48
SYCE2Q6PIF2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SYCE2Q6PIF2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.31■■□□□ 1.48
SYCE2Q6PIF2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SYCE2Q6PIF2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SYCE2Q6PIF2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.31■■□□□ 1.48
SYCE2Q6PIF2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SYCE2Q6PIF2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.31■■□□□ 1.48
SYCE2Q6PIF2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SYCE2Q6PIF2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms