Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC092437.1-201ENST00000624794 1048 ntBASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTCRAQ6ISU1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.33■■□□□ 1.49
PTCRAQ6ISU1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.33■■□□□ 1.49
PTCRAQ6ISU1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PTCRAQ6ISU1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PTCRAQ6ISU1 AL138724.1-201ENST00000606771 1088 ntBASIC24.33■■□□□ 1.49
PTCRAQ6ISU1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.33■■□□□ 1.49
PTCRAQ6ISU1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 AC099791.2-201ENST00000605725 427 ntBASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PTCRAQ6ISU1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 LINC01003-201ENST00000564834 1764 ntBASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PTCRAQ6ISU1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PTCRAQ6ISU1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCRAQ6ISU1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCRAQ6ISU1 AC004911.1-201ENST00000416316 871 ntBASIC24.29■■□□□ 1.48
PTCRAQ6ISU1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCRAQ6ISU1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.29■■□□□ 1.48
PTCRAQ6ISU1 AP004609.3-201ENST00000610705 1884 ntBASIC24.28■■□□□ 1.48
PTCRAQ6ISU1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PTCRAQ6ISU1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCRAQ6ISU1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PTCRAQ6ISU1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.28■■□□□ 1.48
PTCRAQ6ISU1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.28■■□□□ 1.48
PTCRAQ6ISU1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.27■■□□□ 1.48
PTCRAQ6ISU1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.27■■□□□ 1.48
PTCRAQ6ISU1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCRAQ6ISU1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.27■■□□□ 1.48
PTCRAQ6ISU1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCRAQ6ISU1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCRAQ6ISU1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.27■■□□□ 1.48
PTCRAQ6ISU1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.27■■□□□ 1.48
PTCRAQ6ISU1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCRAQ6ISU1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCRAQ6ISU1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCRAQ6ISU1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PTCRAQ6ISU1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.26■■□□□ 1.47
PTCRAQ6ISU1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.26■■□□□ 1.47
PTCRAQ6ISU1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.26■■□□□ 1.47
PTCRAQ6ISU1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PTCRAQ6ISU1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCRAQ6ISU1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.25■■□□□ 1.47
PTCRAQ6ISU1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.25■■□□□ 1.47
PTCRAQ6ISU1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCRAQ6ISU1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCRAQ6ISU1 YBX1P1-201ENST00000445822 960 ntBASIC24.24■■□□□ 1.47
PTCRAQ6ISU1 AL031602.1-201ENST00000633169 911 ntBASIC24.24■■□□□ 1.47
PTCRAQ6ISU1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCRAQ6ISU1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.24■■□□□ 1.47
PTCRAQ6ISU1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCRAQ6ISU1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.22■■□□□ 1.47
PTCRAQ6ISU1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.22■■□□□ 1.47
PTCRAQ6ISU1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCRAQ6ISU1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCRAQ6ISU1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PTCRAQ6ISU1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.22■■□□□ 1.47
PTCRAQ6ISU1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.22■■□□□ 1.47
PTCRAQ6ISU1 AC233992.3-201ENST00000607491 485 ntBASIC24.22■■□□□ 1.47
PTCRAQ6ISU1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PTCRAQ6ISU1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms