Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 NUP1YOR098C 3231 nt5.58□□□□□ -1.52
RPA49Q01080 VCX1YDL128W 1236 nt5.58□□□□□ -1.52
RPA49Q01080 COX17YLL009C 210 nt5.58□□□□□ -1.52
RPA49Q01080 OCA1YNL099C 717 nt5.58□□□□□ -1.52
RPA49Q01080 ETR1YBR026C 1143 nt5.58□□□□□ -1.52
RPA49Q01080 SCP1YOR367W 603 nt5.58□□□□□ -1.52
RPA49Q01080 HPF1YOL155C 2904 nt5.58□□□□□ -1.52
RPA49Q01080 COQ6YGR255C 1440 nt5.57□□□□□ -1.52
RPA49Q01080 THI21YPL258C 1656 nt5.57□□□□□ -1.52
RPA49Q01080 UPS3YDR185C 540 nt5.57□□□□□ -1.52
RPA49Q01080 SUA5YGL169W 1281 nt5.57□□□□□ -1.52
RPA49Q01080 YPT32YGL210W 669 nt5.57□□□□□ -1.52
RPA49Q01080 BRF1YGR246C 1791 nt5.57□□□□□ -1.52
RPA49Q01080 RIM101YHL027W 1878 nt5.56□□□□□ -1.52
RPA49Q01080 GCS1YDL226C 1059 nt5.56□□□□□ -1.52
RPA49Q01080 YGR291CYGR291C 222 nt5.56□□□□□ -1.52
RPA49Q01080 ARP1YHR129C 1155 nt5.56□□□□□ -1.52
RPA49Q01080 PRM10YJL108C 1152 nt5.56□□□□□ -1.52
RPA49Q01080 YBR298C-AYBR298C-A 222 nt5.56□□□□□ -1.52
RPA49Q01080 FOB1YDR110W 1701 nt5.56□□□□□ -1.52
RPA49Q01080 SSZ1YHR064C 1617 nt5.56□□□□□ -1.52
RPA49Q01080 PMT2YAL023C 2280 nt5.55□□□□□ -1.52
RPA49Q01080 VID30YGL227W 2877 nt5.55□□□□□ -1.52
RPA49Q01080 VPS70YJR126C 2436 nt5.55□□□□□ -1.52
RPA49Q01080 NDC1YML031W 1968 nt5.55□□□□□ -1.52
RPA49Q01080 YDR053WYDR053W 396 nt5.55□□□□□ -1.52
RPA49Q01080 NQM1YGR043C 1002 nt5.55□□□□□ -1.52
RPA49Q01080 PRP45YAL032C 1140 nt5.55□□□□□ -1.52
RPA49Q01080 YKL223WYKL223W 333 nt5.55□□□□□ -1.52
RPA49Q01080 LDB18YLL049W 540 nt5.55□□□□□ -1.52
RPA49Q01080 MRPL15YLR312W-A 762 nt5.55□□□□□ -1.52
RPA49Q01080 YNL108CYNL108C 813 nt5.55□□□□□ -1.52
RPA49Q01080 NPT1YOR209C 1290 nt5.55□□□□□ -1.52
RPA49Q01080 STE50YCL032W 1041 nt5.55□□□□□ -1.52
RPA49Q01080 RPT4YOR259C 1314 nt5.54□□□□□ -1.52
RPA49Q01080 TKL1YPR074C 2043 nt5.54□□□□□ -1.52
RPA49Q01080 HMLALPHA1YCL066W 528 nt5.54□□□□□ -1.52
RPA49Q01080 MATALPHA1YCR040W 528 nt5.54□□□□□ -1.52
RPA49Q01080 GON7YJL184W 372 nt5.54□□□□□ -1.52
RPA49Q01080 YKR041WYKR041W 753 nt5.54□□□□□ -1.52
RPA49Q01080 SCO1YBR037C 888 nt5.54□□□□□ -1.52
RPA49Q01080 CWC27YPL064C 906 nt5.54□□□□□ -1.52
RPA49Q01080 HSP26YBR072W 645 nt5.54□□□□□ -1.52
RPA49Q01080 DCC1YCL016C 1143 nt5.54□□□□□ -1.52
RPA49Q01080 NOT3YIL038C 2511 nt5.54□□□□□ -1.52
RPA49Q01080 GAL10YBR019C 2100 nt5.53□□□□□ -1.52
RPA49Q01080 ATG20YDL113C 1923 nt5.53□□□□□ -1.52
RPA49Q01080 RTT103YDR289C 1230 nt5.53□□□□□ -1.52
RPA49Q01080 RRT7YLL030C 342 nt5.53□□□□□ -1.52
RPA49Q01080 SEC13YLR208W 894 nt5.53□□□□□ -1.52
RPA49Q01080 RSA3YLR221C 663 nt5.53□□□□□ -1.52
RPA49Q01080 YLR283WYLR283W 945 nt5.53□□□□□ -1.52
RPA49Q01080 SEC17YBL050W 879 nt5.53□□□□□ -1.52
RPA49Q01080 BBP1YPL255W 1158 nt5.53□□□□□ -1.52
RPA49Q01080 NOP2YNL061W 1857 nt5.53□□□□□ -1.52
RPA49Q01080 RPN5YDL147W 1338 nt5.52□□□□□ -1.53
RPA49Q01080 UTR4YEL038W 684 nt5.52□□□□□ -1.53
RPA49Q01080 YEL077CYEL077C 3834 nt5.52□□□□□ -1.53
RPA49Q01080 CWC25YNL245C 540 nt5.52□□□□□ -1.53
RPA49Q01080 PHA2YNL316C 1005 nt5.52□□□□□ -1.53
RPA49Q01080 MCM6YGL201C 3054 nt5.52□□□□□ -1.53
RPA49Q01080 AVT3YKL146W 2079 nt5.52□□□□□ -1.53
RPA49Q01080 SKN1YGR143W 2316 nt5.52□□□□□ -1.53
RPA49Q01080 MET7YOR241W 1647 nt5.52□□□□□ -1.53
RPA49Q01080 MTC1YJL123C 1437 nt5.51□□□□□ -1.53
RPA49Q01080 VMA13YPR036W 1437 nt5.51□□□□□ -1.53
RPA49Q01080 HAP1YLR256W 4509 nt5.51□□□□□ -1.53
RPA49Q01080 YHR095WYHR095W 495 nt5.51□□□□□ -1.53
RPA49Q01080 RPA49YNL248C 1248 nt5.51□□□□□ -1.53
RPA49Q01080 SSO1YPL232W 873 nt5.51□□□□□ -1.53
RPA49Q01080 DIT1YDR403W 1611 nt5.51□□□□□ -1.53
RPA49Q01080 TEL2YGR099W 2067 nt5.51□□□□□ -1.53
RPA49Q01080 SRG1SRG1 551 nt5.5□□□□□ -1.53
RPA49Q01080 APN1YKL114C 1104 nt5.5□□□□□ -1.53
RPA49Q01080 ATP14YLR295C 375 nt5.5□□□□□ -1.53
RPA49Q01080 MTF1YMR228W 1026 nt5.5□□□□□ -1.53
RPA49Q01080 HEM15YOR176W 1182 nt5.5□□□□□ -1.53
RPA49Q01080 YIL092WYIL092W 1902 nt5.5□□□□□ -1.53
RPA49Q01080 PDC1YLR044C 1692 nt5.5□□□□□ -1.53
RPA49Q01080 RBA50YDR527W 1320 nt5.49□□□□□ -1.53
RPA49Q01080 MPM1YJL066C 759 nt5.49□□□□□ -1.53
RPA49Q01080 HSP150YJL159W 1242 nt5.49□□□□□ -1.53
RPA49Q01080 YMR147WYMR147W 672 nt5.49□□□□□ -1.53
RPA49Q01080 YOR024WYOR024W 324 nt5.49□□□□□ -1.53
RPA49Q01080 RPL21BYPL079W 483 nt5.49□□□□□ -1.53
RPA49Q01080 PRE2YPR103W 864 nt5.49□□□□□ -1.53
RPA49Q01080 HOS2YGL194C 1359 nt5.49□□□□□ -1.53
RPA49Q01080 APJ1YNL077W 1587 nt5.49□□□□□ -1.53
RPA49Q01080 MMR1YLR190W 1476 nt5.48□□□□□ -1.53
RPA49Q01080 RAM1YDL090C 1296 nt5.48□□□□□ -1.53
RPA49Q01080 ERD1YDR414C 1089 nt5.48□□□□□ -1.53
RPA49Q01080 GAT4YIR013C 366 nt5.48□□□□□ -1.53
RPA49Q01080 YPL062WYPL062W 405 nt5.48□□□□□ -1.53
RPA49Q01080 MKK2YPL140C 1521 nt5.48□□□□□ -1.53
RPA49Q01080 EIS1YMR031C 2532 nt5.47□□□□□ -1.53
RPA49Q01080 YDR134CYDR134C 411 nt5.47□□□□□ -1.53
RPA49Q01080 YIR043CYIR043C 693 nt5.47□□□□□ -1.53
RPA49Q01080 PNP1YLR209C 936 nt5.47□□□□□ -1.53
RPA49Q01080 SER1YOR184W 1188 nt5.47□□□□□ -1.53
RPA49Q01080 DUR1,2YBR208C 5508 nt5.47□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms