Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01971-201ENST00000617888 1048 ntBASIC16.03■□□□□ 0.16
CKS1BP61024 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKS1BP61024 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CKS1BP61024 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CKS1BP61024 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.03■□□□□ 0.16
CKS1BP61024 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKS1BP61024 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKS1BP61024 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CKS1BP61024 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CKS1BP61024 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CKS1BP61024 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKS1BP61024 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CKS1BP61024 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CKS1BP61024 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKS1BP61024 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.02■□□□□ 0.16
CKS1BP61024 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKS1BP61024 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CKS1BP61024 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CKS1BP61024 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CKS1BP61024 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CKS1BP61024 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CKS1BP61024 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CKS1BP61024 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CKS1BP61024 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CKS1BP61024 MIR219A2-201ENST00000608502 1504 ntBASIC16.01■□□□□ 0.15
CKS1BP61024 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CKS1BP61024 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CKS1BP61024 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CKS1BP61024 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CKS1BP61024 AL391422.3-201ENST00000603791 2761 ntBASIC16.01■□□□□ 0.15
CKS1BP61024 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CKS1BP61024 C1orf229-201ENST00000623686 2258 ntBASIC16.01■□□□□ 0.15
CKS1BP61024 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16■□□□□ 0.15
CKS1BP61024 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16■□□□□ 0.15
CKS1BP61024 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 AC138932.3-201ENST00000567634 1902 ntBASIC16■□□□□ 0.15
CKS1BP61024 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 AC138932.1-201ENST00000534164 6830 ntBASIC16■□□□□ 0.15
CKS1BP61024 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CKS1BP61024 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16■□□□□ 0.15
CKS1BP61024 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16■□□□□ 0.15
CKS1BP61024 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CKS1BP61024 AL359258.2-201ENST00000564063 1566 ntBASIC16■□□□□ 0.15
CKS1BP61024 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CKS1BP61024 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.99■□□□□ 0.15
CKS1BP61024 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L13-201ENST00000554103 1267 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L15-201ENST00000611059 1267 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L23-201ENST00000615195 1269 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L24-201ENST00000617576 1269 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L22-201ENST00000618238 1269 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L20-201ENST00000619712 1269 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L21-201ENST00000622058 1269 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L10-201ENST00000622460 1267 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 DUX4L25-201ENST00000624915 1269 ntBASIC15.99■□□□□ 0.15
CKS1BP61024 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CKS1BP61024 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CKS1BP61024 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.99■□□□□ 0.15
CKS1BP61024 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKS1BP61024 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CKS1BP61024 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CKS1BP61024 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CKS1BP61024 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKS1BP61024 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKS1BP61024 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.98■□□□□ 0.15
CKS1BP61024 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKS1BP61024 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.98■□□□□ 0.15
CKS1BP61024 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CKS1BP61024 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CKS1BP61024 AC092667.1-201ENST00000434301 2586 ntBASIC15.97■□□□□ 0.15
CKS1BP61024 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 AC096887.2-201ENST00000623443 1957 ntBASIC15.97■□□□□ 0.15
CKS1BP61024 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC15.97■□□□□ 0.15
CKS1BP61024 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 AC148477.6-201ENST00000623746 465 ntBASIC15.97■□□□□ 0.15
CKS1BP61024 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.97■□□□□ 0.15
CKS1BP61024 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
CKS1BP61024 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS1BP61024 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms