Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 tR(ACG)DtR(ACG)D 73 nt6.14□□□□□ -1.43
SUB1P54000 tR(ACG)EtR(ACG)E 73 nt6.14□□□□□ -1.43
SUB1P54000 tR(ACG)KtR(ACG)K 73 nt6.14□□□□□ -1.43
SUB1P54000 tR(ACG)LtR(ACG)L 73 nt6.14□□□□□ -1.43
SUB1P54000 tR(ACG)OtR(ACG)O 73 nt6.14□□□□□ -1.43
SUB1P54000 YKR045CYKR045C 552 nt6.14□□□□□ -1.43
SUB1P54000 RPR1RPR1 369 nt6.14□□□□□ -1.43
SUB1P54000 CSL4YNL232W 879 nt6.14□□□□□ -1.43
SUB1P54000 RRS1YOR294W 612 nt6.14□□□□□ -1.43
SUB1P54000 BIO3YNR058W 1443 nt6.14□□□□□ -1.43
SUB1P54000 SET4YJL105W 1683 nt6.14□□□□□ -1.43
SUB1P54000 YAP1801YHR161C 1914 nt6.13□□□□□ -1.43
SUB1P54000 KIN28YDL108W 921 nt6.13□□□□□ -1.43
SUB1P54000 LIA1YJR070C 978 nt6.13□□□□□ -1.43
SUB1P54000 YJU3YKL094W 942 nt6.13□□□□□ -1.43
SUB1P54000 YKL153WYKL153W 510 nt6.13□□□□□ -1.43
SUB1P54000 GLC8YMR311C 690 nt6.13□□□□□ -1.43
SUB1P54000 YNR040WYNR040W 771 nt6.13□□□□□ -1.43
SUB1P54000 YOL131WYOL131W 327 nt6.13□□□□□ -1.43
SUB1P54000 MCP1YOR228C 909 nt6.13□□□□□ -1.43
SUB1P54000 YPL114WYPL114W 420 nt6.13□□□□□ -1.43
SUB1P54000 OPY2YPR075C 1083 nt6.13□□□□□ -1.43
SUB1P54000 HST1YOL068C 1512 nt6.13□□□□□ -1.43
SUB1P54000 GAL4YPL248C 2646 nt6.12□□□□□ -1.43
SUB1P54000 SIT4YDL047W 936 nt6.12□□□□□ -1.43
SUB1P54000 COQ4YDR204W 1008 nt6.12□□□□□ -1.43
SUB1P54000 CHO1YER026C 831 nt6.12□□□□□ -1.43
SUB1P54000 MHO1YJR008W 1017 nt6.12□□□□□ -1.43
SUB1P54000 MHT1YLL062C 975 nt6.12□□□□□ -1.43
SUB1P54000 YNG1YOR064C 660 nt6.12□□□□□ -1.43
SUB1P54000 SPE3YPR069C 882 nt6.12□□□□□ -1.43
SUB1P54000 FRE1YLR214W 2061 nt6.11□□□□□ -1.43
SUB1P54000 TMN2YDR107C 2019 nt6.11□□□□□ -1.43
SUB1P54000 NGR1YBR212W 2019 nt6.11□□□□□ -1.43
SUB1P54000 RGT1YKL038W 3513 nt6.11□□□□□ -1.43
SUB1P54000 TOS3YGL179C 1683 nt6.11□□□□□ -1.43
SUB1P54000 TNA1YGR260W 1605 nt6.11□□□□□ -1.43
SUB1P54000 ERG4YGL012W 1422 nt6.11□□□□□ -1.43
SUB1P54000 LAP3YNL239W 1365 nt6.11□□□□□ -1.43
SUB1P54000 MRPL35YDR322W 1104 nt6.11□□□□□ -1.43
SUB1P54000 TAF9YMR236W 474 nt6.11□□□□□ -1.43
SUB1P54000 YNL143CYNL143C 393 nt6.11□□□□□ -1.43
SUB1P54000 FSF1YOR271C 984 nt6.11□□□□□ -1.43
SUB1P54000 VTH1YIL173W 4650 nt6.1□□□□□ -1.43
SUB1P54000 VTH2YJL222W 4650 nt6.1□□□□□ -1.43
SUB1P54000 YER085CYER085C 522 nt6.1□□□□□ -1.43
SUB1P54000 YJR084WYJR084W 1272 nt6.1□□□□□ -1.43
SUB1P54000 PGU1YJR153W 1086 nt6.1□□□□□ -1.43
SUB1P54000 MRM1YOR201C 1239 nt6.1□□□□□ -1.43
SUB1P54000 MNN2YBR015C 1794 nt6.1□□□□□ -1.43
SUB1P54000 TRE1YPL176C 2352 nt6.09□□□□□ -1.43
SUB1P54000 CLD1YGR110W 1338 nt6.09□□□□□ -1.43
SUB1P54000 YEH1YLL012W 1722 nt6.09□□□□□ -1.43
SUB1P54000 RAD59YDL059C 717 nt6.09□□□□□ -1.43
SUB1P54000 SDH4YDR178W 546 nt6.09□□□□□ -1.43
SUB1P54000 CWC21YDR482C 408 nt6.09□□□□□ -1.43
SUB1P54000 SPC34YKR037C 888 nt6.09□□□□□ -1.43
SUB1P54000 NAT3YPR131C 588 nt6.09□□□□□ -1.43
SUB1P54000 HSP78YDR258C 2436 nt6.09□□□□□ -1.43
SUB1P54000 STP4YDL048C 1473 nt6.09□□□□□ -1.44
SUB1P54000 MPH3YJR160C 1809 nt6.09□□□□□ -1.44
SUB1P54000 EPS1YIL005W 2106 nt6.08□□□□□ -1.44
SUB1P54000 PRP46YPL151C 1356 nt6.08□□□□□ -1.44
SUB1P54000 GPD1YDL022W 1176 nt6.08□□□□□ -1.44
SUB1P54000 COS4YFL062W 1140 nt6.08□□□□□ -1.44
SUB1P54000 OM45YIL136W 1182 nt6.08□□□□□ -1.44
SUB1P54000 MRS3YJL133W 945 nt6.08□□□□□ -1.44
SUB1P54000 YJL215CYJL215C 360 nt6.08□□□□□ -1.44
SUB1P54000 TSR2YLR435W 618 nt6.08□□□□□ -1.44
SUB1P54000 TSA1YML028W 591 nt6.08□□□□□ -1.44
SUB1P54000 COS3YML132W 1140 nt6.08□□□□□ -1.44
SUB1P54000 PUS4YNL292W 1212 nt6.08□□□□□ -1.44
SUB1P54000 ARO7YPR060C 771 nt6.08□□□□□ -1.44
SUB1P54000 UBA3YPR066W 900 nt6.08□□□□□ -1.44
SUB1P54000 ISA2YPR067W 558 nt6.08□□□□□ -1.44
SUB1P54000 COS2YBR302C 1140 nt6.08□□□□□ -1.44
SUB1P54000 PLB3YOL011W 2061 nt6.08□□□□□ -1.44
SUB1P54000 BDP1YNL039W 1785 nt6.08□□□□□ -1.44
SUB1P54000 ATP1YBL099W 1638 nt6.07□□□□□ -1.44
SUB1P54000 NHA1YLR138W 2958 nt6.07□□□□□ -1.44
SUB1P54000 ZRC1YMR243C 1329 nt6.07□□□□□ -1.44
SUB1P54000 YER148W-AYER148W-A 579 nt6.07□□□□□ -1.44
SUB1P54000 YKL223WYKL223W 333 nt6.07□□□□□ -1.44
SUB1P54000 PFA3YNL326C 1011 nt6.07□□□□□ -1.44
SUB1P54000 SKM1YOL113W 1968 nt6.07□□□□□ -1.44
SUB1P54000 MOT2YER068W 1764 nt6.06□□□□□ -1.44
SUB1P54000 AIM10YER087W 1731 nt6.06□□□□□ -1.44
SUB1P54000 VPS36YLR417W 1701 nt6.06□□□□□ -1.44
SUB1P54000 MRPS18YNL306W 654 nt6.06□□□□□ -1.44
SUB1P54000 SGF29YCL010C 780 nt6.06□□□□□ -1.44
SUB1P54000 NOT3YIL038C 2511 nt6.06□□□□□ -1.44
SUB1P54000 SPO77YLR341W 1434 nt6.06□□□□□ -1.44
SUB1P54000 FRS1YLR060W 1788 nt6.06□□□□□ -1.44
SUB1P54000 LEU1YGL009C 2340 nt6.05□□□□□ -1.44
SUB1P54000 GCG1YER163C 699 nt6.05□□□□□ -1.44
SUB1P54000 ISY1YJR050W 708 nt6.05□□□□□ -1.44
SUB1P54000 PRE5YMR314W 705 nt6.05□□□□□ -1.44
SUB1P54000 AST1YBL069W 1290 nt6.05□□□□□ -1.44
SUB1P54000 PDX3YBR035C 687 nt6.05□□□□□ -1.44
SUB1P54000 YPR114WYPR114W 948 nt6.05□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms