Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 ARB1YER036C 1833 nt5.33□□□□□ -1.56
YNL040WP53960 ERD1YDR414C 1089 nt5.33□□□□□ -1.56
YNL040WP53960 NAG1YGR031C-A 492 nt5.33□□□□□ -1.56
YNL040WP53960 CTR3YLR411W 726 nt5.33□□□□□ -1.56
YNL040WP53960 BBP1YPL255W 1158 nt5.33□□□□□ -1.56
YNL040WP53960 APM2YHL019C 1818 nt5.32□□□□□ -1.56
YNL040WP53960 TKL1YPR074C 2043 nt5.32□□□□□ -1.56
YNL040WP53960 GTO1YGR154C 1071 nt5.32□□□□□ -1.56
YNL040WP53960 PUS5YLR165C 765 nt5.32□□□□□ -1.56
YNL040WP53960 YCL041CYCL041C 495 nt5.32□□□□□ -1.56
YNL040WP53960 YJR015WYJR015W 1533 nt5.32□□□□□ -1.56
YNL040WP53960 YMR155WYMR155W 1644 nt5.31□□□□□ -1.56
YNL040WP53960 PUS1YPL212C 1635 nt5.31□□□□□ -1.56
YNL040WP53960 APJ1YNL077W 1587 nt5.31□□□□□ -1.56
YNL040WP53960 YPL062WYPL062W 405 nt5.31□□□□□ -1.56
YNL040WP53960 STE7YDL159W 1548 nt5.31□□□□□ -1.56
YNL040WP53960 DAL81YIR023W 2913 nt5.3□□□□□ -1.56
YNL040WP53960 MSS1YMR023C 1581 nt5.3□□□□□ -1.56
YNL040WP53960 YDR401WYDR401W 564 nt5.3□□□□□ -1.56
YNL040WP53960 PNP1YLR209C 936 nt5.3□□□□□ -1.56
YNL040WP53960 DCI1YOR180C 816 nt5.3□□□□□ -1.56
YNL040WP53960 PHO90YJL198W 2646 nt5.3□□□□□ -1.56
YNL040WP53960 PAL1YDR348C 1500 nt5.29□□□□□ -1.56
YNL040WP53960 YDR134CYDR134C 411 nt5.29□□□□□ -1.56
YNL040WP53960 PRM10YJL108C 1152 nt5.29□□□□□ -1.56
YNL040WP53960 ERG3YLR056W 1098 nt5.29□□□□□ -1.56
YNL040WP53960 TFB4YPR056W 1017 nt5.29□□□□□ -1.56
YNL040WP53960 SUE1YPR151C 621 nt5.29□□□□□ -1.56
YNL040WP53960 IMA2YOL157C 1770 nt5.29□□□□□ -1.56
YNL040WP53960 UBP9YER098W 2265 nt5.28□□□□□ -1.56
YNL040WP53960 SEH1YGL100W 1050 nt5.28□□□□□ -1.56
YNL040WP53960 BUB3YOR026W 1026 nt5.28□□□□□ -1.56
YNL040WP53960 OST3YOR085W 1053 nt5.28□□□□□ -1.56
YNL040WP53960 CAM1YPL048W 1248 nt5.28□□□□□ -1.56
YNL040WP53960 SSO1YPL232W 873 nt5.28□□□□□ -1.56
YNL040WP53960 FLC3YGL139W 2409 nt5.28□□□□□ -1.56
YNL040WP53960 NDC1YML031W 1968 nt5.27□□□□□ -1.57
YNL040WP53960 NOT3YIL038C 2511 nt5.27□□□□□ -1.57
YNL040WP53960 KTI12YKL110C 942 nt5.27□□□□□ -1.57
YNL040WP53960 PRR1YKL116C 1557 nt5.27□□□□□ -1.57
YNL040WP53960 MDY2YOL111C 639 nt5.27□□□□□ -1.57
YNL040WP53960 ADE4YMR300C 1533 nt5.27□□□□□ -1.57
YNL040WP53960 BNA5YLR231C 1362 nt5.27□□□□□ -1.57
YNL040WP53960 THP1YOL072W 1368 nt5.27□□□□□ -1.57
YNL040WP53960 RSC6YCR052W 1452 nt5.26□□□□□ -1.57
YNL040WP53960 YDL023CYDL023C 321 nt5.26□□□□□ -1.57
YNL040WP53960 AAD4YDL243C 990 nt5.26□□□□□ -1.57
YNL040WP53960 NIT2YJL126W 924 nt5.26□□□□□ -1.57
YNL040WP53960 SER1YOR184W 1188 nt5.26□□□□□ -1.57
YNL040WP53960 snR32snR32 188 nt5.26□□□□□ -1.57
YNL040WP53960 BRE2YLR015W 1518 nt5.25□□□□□ -1.57
YNL040WP53960 SCM3YDL139C 672 nt5.25□□□□□ -1.57
YNL040WP53960 PHO86YJL117W 936 nt5.25□□□□□ -1.57
YNL040WP53960 YLR283WYLR283W 945 nt5.25□□□□□ -1.57
YNL040WP53960 MGS1YNL218W 1764 nt5.24□□□□□ -1.57
YNL040WP53960 ASN1YPR145W 1719 nt5.24□□□□□ -1.57
YNL040WP53960 DRS1YLL008W 2259 nt5.24□□□□□ -1.57
YNL040WP53960 SPL2YHR136C 447 nt5.24□□□□□ -1.57
YNL040WP53960 PPG1YNR032W 1107 nt5.24□□□□□ -1.57
YNL040WP53960 NGR1YBR212W 2019 nt5.24□□□□□ -1.57
YNL040WP53960 IES1YFL013C 2079 nt5.24□□□□□ -1.57
YNL040WP53960 AVO1YOL078W 3531 nt5.23□□□□□ -1.57
YNL040WP53960 HXT14YNL318C 1623 nt5.23□□□□□ -1.57
YNL040WP53960 VPS1YKR001C 2115 nt5.23□□□□□ -1.57
YNL040WP53960 SCW10YMR305C 1170 nt5.23□□□□□ -1.57
YNL040WP53960 SOL1YNR034W 966 nt5.23□□□□□ -1.57
YNL040WP53960 RPL3YOR063W 1164 nt5.23□□□□□ -1.57
YNL040WP53960 HSP26YBR072W 645 nt5.23□□□□□ -1.57
YNL040WP53960 GLT1YDL171C 6438 nt5.23□□□□□ -1.57
YNL040WP53960 SRP101YDR292C 1866 nt5.22□□□□□ -1.57
YNL040WP53960 IWR1YDL115C 1062 nt5.22□□□□□ -1.57
YNL040WP53960 RPN12YFR052W 825 nt5.22□□□□□ -1.57
YNL040WP53960 YNL165WYNL165W 1221 nt5.22□□□□□ -1.57
YNL040WP53960 SEC18YBR080C 2277 nt5.22□□□□□ -1.57
YNL040WP53960 EIS1YMR031C 2532 nt5.22□□□□□ -1.57
YNL040WP53960 ELP2YGR200C 2367 nt5.21□□□□□ -1.57
YNL040WP53960 ENP1YBR247C 1452 nt5.21□□□□□ -1.58
YNL040WP53960 MHF2YDL160C-A 243 nt5.21□□□□□ -1.58
YNL040WP53960 MNN10YDR245W 1182 nt5.21□□□□□ -1.58
YNL040WP53960 BUD28YLR062C 378 nt5.21□□□□□ -1.58
YNL040WP53960 ZUO1YGR285C 1302 nt5.21□□□□□ -1.58
YNL040WP53960 GUP2YPL189W 1830 nt5.2□□□□□ -1.58
YNL040WP53960 YOR1YGR281W 4434 nt5.2□□□□□ -1.58
YNL040WP53960 ATG7YHR171W 1893 nt5.2□□□□□ -1.58
YNL040WP53960 PMT2YAL023C 2280 nt5.2□□□□□ -1.58
YNL040WP53960 RPL28YGL103W 450 nt5.2□□□□□ -1.58
YNL040WP53960 ORM1YGR038W 669 nt5.2□□□□□ -1.58
YNL040WP53960 BGL2YGR282C 942 nt5.2□□□□□ -1.58
YNL040WP53960 YIR020W-AYIR020W-A 243 nt5.2□□□□□ -1.58
YNL040WP53960 ATP14YLR295C 375 nt5.2□□□□□ -1.58
YNL040WP53960 MRL1YPR079W 1146 nt5.2□□□□□ -1.58
YNL040WP53960 JEM1YJL073W 1938 nt5.2□□□□□ -1.58
YNL040WP53960 FUI1YBL042C 1920 nt5.2□□□□□ -1.58
YNL040WP53960 VPS72YDR485C 2388 nt5.2□□□□□ -1.58
YNL040WP53960 TPS3YMR261C 3165 nt5.2□□□□□ -1.58
YNL040WP53960 YJL206CYJL206C 2277 nt5.2□□□□□ -1.58
YNL040WP53960 CDC4YFL009W 2340 nt5.19□□□□□ -1.58
YNL040WP53960 DBP8YHR169W 1296 nt5.19□□□□□ -1.58
YNL040WP53960 RPB4YJL140W 666 nt5.19□□□□□ -1.58
YNL040WP53960 FUN19YAL034C 1242 nt5.19□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 25 ms