Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 SUA5YGL169W 1281 nt4.07□□□□□ -1.76
VPS55P47111 ATP14YLR295C 375 nt4.07□□□□□ -1.76
VPS55P47111 SCO1YBR037C 888 nt4.07□□□□□ -1.76
VPS55P47111 DCC1YCL016C 1143 nt4.07□□□□□ -1.76
VPS55P47111 AVT3YKL146W 2079 nt4.07□□□□□ -1.76
VPS55P47111 ATG20YDL113C 1923 nt4.07□□□□□ -1.76
VPS55P47111 YTA6YPL074W 2265 nt4.06□□□□□ -1.76
VPS55P47111 YMR027WYMR027W 1413 nt4.06□□□□□ -1.76
VPS55P47111 GCS1YDL226C 1059 nt4.06□□□□□ -1.76
VPS55P47111 UTR4YEL038W 684 nt4.06□□□□□ -1.76
VPS55P47111 GRX4YER174C 735 nt4.06□□□□□ -1.76
VPS55P47111 YKR041WYKR041W 753 nt4.06□□□□□ -1.76
VPS55P47111 YLR283WYLR283W 945 nt4.06□□□□□ -1.76
VPS55P47111 SYG1YIL047C 2709 nt4.06□□□□□ -1.76
VPS55P47111 SSZ1YHR064C 1617 nt4.06□□□□□ -1.76
VPS55P47111 DAL81YIR023W 2913 nt4.05□□□□□ -1.76
VPS55P47111 BUB3YOR026W 1026 nt4.05□□□□□ -1.76
VPS55P47111 BIT2YBR270C 1638 nt4.05□□□□□ -1.76
VPS55P47111 RAT1YOR048C 3021 nt4.05□□□□□ -1.76
VPS55P47111 VID30YGL227W 2877 nt4.04□□□□□ -1.76
VPS55P47111 MTC1YJL123C 1437 nt4.04□□□□□ -1.76
VPS55P47111 IES1YFL013C 2079 nt4.04□□□□□ -1.76
VPS55P47111 BUD9YGR041W 1644 nt4.04□□□□□ -1.76
VPS55P47111 YDR134CYDR134C 411 nt4.04□□□□□ -1.76
VPS55P47111 YGL185CYGL185C 1140 nt4.04□□□□□ -1.76
VPS55P47111 NQM1YGR043C 1002 nt4.04□□□□□ -1.76
VPS55P47111 APJ1YNL077W 1587 nt4.04□□□□□ -1.76
VPS55P47111 VMA13YPR036W 1437 nt4.04□□□□□ -1.76
VPS55P47111 NOT3YIL038C 2511 nt4.03□□□□□ -1.76
VPS55P47111 YFR035CYFR035C 345 nt4.03□□□□□ -1.76
VPS55P47111 MPM1YJL066C 759 nt4.03□□□□□ -1.76
VPS55P47111 YOR024WYOR024W 324 nt4.03□□□□□ -1.76
VPS55P47111 MET8YBR213W 825 nt4.03□□□□□ -1.76
VPS55P47111 NGR1YBR212W 2019 nt4.03□□□□□ -1.76
VPS55P47111 PDI1YCL043C 1569 nt4.02□□□□□ -1.77
VPS55P47111 ERD1YDR414C 1089 nt4.02□□□□□ -1.77
VPS55P47111 NAG1YGR031C-A 492 nt4.02□□□□□ -1.77
VPS55P47111 YJR085CYJR085C 318 nt4.02□□□□□ -1.77
VPS55P47111 SER1YOR184W 1188 nt4.02□□□□□ -1.77
VPS55P47111 ENV9YOR246C 993 nt4.02□□□□□ -1.77
VPS55P47111 TPS3YMR261C 3165 nt4.02□□□□□ -1.77
VPS55P47111 SLT2YHR030C 1455 nt4.01□□□□□ -1.77
VPS55P47111 MRF1YGL143C 1242 nt4.01□□□□□ -1.77
VPS55P47111 BUD28YLR062C 378 nt4.01□□□□□ -1.77
VPS55P47111 RPL21BYPL079W 483 nt4.01□□□□□ -1.77
VPS55P47111 MRL1YPR079W 1146 nt4.01□□□□□ -1.77
VPS55P47111 PSE1YMR308C 3270 nt4.01□□□□□ -1.77
VPS55P47111 YDR396WYDR396W 501 nt4□□□□□ -1.77
VPS55P47111 SFK1YKL051W 1062 nt4□□□□□ -1.77
VPS55P47111 PRE7YBL041W 726 nt4□□□□□ -1.77
VPS55P47111 VHS1YDR247W 1386 nt4□□□□□ -1.77
VPS55P47111 IWR1YDL115C 1062 nt3.99□□□□□ -1.77
VPS55P47111 RPN12YFR052W 825 nt3.99□□□□□ -1.77
VPS55P47111 MTW1YAL034W-A 870 nt3.99□□□□□ -1.77
VPS55P47111 EEB1YPL095C 1371 nt3.99□□□□□ -1.77
VPS55P47111 CDC4YFL009W 2340 nt3.99□□□□□ -1.77
VPS55P47111 VAM7YGL212W 951 nt3.98□□□□□ -1.77
VPS55P47111 PAL1YDR348C 1500 nt3.98□□□□□ -1.77
VPS55P47111 ASK10YGR097W 3441 nt3.98□□□□□ -1.77
VPS55P47111 YIL067CYIL067C 2037 nt3.98□□□□□ -1.77
VPS55P47111 YDR261C-DYDR261C-D 4815 nt3.97□□□□□ -1.77
VPS55P47111 HES1YOR237W 1305 nt3.97□□□□□ -1.77
VPS55P47111 PEX19YDL065C 1029 nt3.97□□□□□ -1.77
VPS55P47111 YER084WYER084W 387 nt3.97□□□□□ -1.77
VPS55P47111 LCP5YER127W 1074 nt3.97□□□□□ -1.77
VPS55P47111 ECT1YGR007W 972 nt3.97□□□□□ -1.77
VPS55P47111 NIT2YJL126W 924 nt3.97□□□□□ -1.77
VPS55P47111 snR10snR10 245 nt3.97□□□□□ -1.77
VPS55P47111 CKB2YOR039W 777 nt3.97□□□□□ -1.77
VPS55P47111 THP1YOL072W 1368 nt3.97□□□□□ -1.77
VPS55P47111 MSH1YHR120W 2880 nt3.96□□□□□ -1.77
VPS55P47111 VAN1YML115C 1608 nt3.96□□□□□ -1.78
VPS55P47111 APM2YHL019C 1818 nt3.96□□□□□ -1.78
VPS55P47111 MNN10YDR245W 1182 nt3.96□□□□□ -1.78
VPS55P47111 SEH1YGL100W 1050 nt3.96□□□□□ -1.78
VPS55P47111 YJL107CYJL107C 1164 nt3.96□□□□□ -1.78
VPS55P47111 PDR16YNL231C 1056 nt3.96□□□□□ -1.78
VPS55P47111 SOL1YNR034W 966 nt3.96□□□□□ -1.78
VPS55P47111 TUB2YFL037W 1374 nt3.96□□□□□ -1.78
VPS55P47111 TOS3YGL179C 1683 nt3.96□□□□□ -1.78
VPS55P47111 HXT5YHR096C 1779 nt3.96□□□□□ -1.78
VPS55P47111 BPL1YDL141W 2073 nt3.95□□□□□ -1.78
VPS55P47111 RML2YEL050C 1182 nt3.95□□□□□ -1.78
VPS55P47111 YGR035W-AYGR035W-A 222 nt3.95□□□□□ -1.78
VPS55P47111 TOM5YPR133W-A 153 nt3.95□□□□□ -1.78
VPS55P47111 YGR125WYGR125W 3111 nt3.95□□□□□ -1.78
VPS55P47111 SEC39YLR440C 2130 nt3.95□□□□□ -1.78
VPS55P47111 MSN2YMR037C 2115 nt3.95□□□□□ -1.78
VPS55P47111 TDA7YNL176C 1911 nt3.95□□□□□ -1.78
VPS55P47111 GPR1YDL035C 2886 nt3.95□□□□□ -1.78
VPS55P47111 PUS1YPL212C 1635 nt3.95□□□□□ -1.78
VPS55P47111 ADE4YMR300C 1533 nt3.95□□□□□ -1.78
VPS55P47111 STE20YHL007C 2820 nt3.94□□□□□ -1.78
VPS55P47111 DAK1YML070W 1755 nt3.94□□□□□ -1.78
VPS55P47111 PRP43YGL120C 2304 nt3.94□□□□□ -1.78
VPS55P47111 TFC6YDR362C 2019 nt3.94□□□□□ -1.78
VPS55P47111 PUS6YGR169C 1215 nt3.94□□□□□ -1.78
VPS55P47111 tR(ACG)JtR(ACG)J 73 nt3.94□□□□□ -1.78
VPS55P47111 SPL2YHR136C 447 nt3.94□□□□□ -1.78
VPS55P47111 RPB4YJL140W 666 nt3.94□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms