Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 NPY1YGL067W 1155 nt4.19□□□□□ -1.74
RPB11P38902 YLR346CYLR346C 306 nt4.19□□□□□ -1.74
RPB11P38902 PGA3YML125C 939 nt4.19□□□□□ -1.74
RPB11P38902 YNR048WYNR048W 1182 nt4.19□□□□□ -1.74
RPB11P38902 ATG12YBR217W 561 nt4.19□□□□□ -1.74
RPB11P38902 GEP3YOR205C 1671 nt4.19□□□□□ -1.74
RPB11P38902 SHE10YGL228W 1734 nt4.18□□□□□ -1.74
RPB11P38902 HXT14YNL318C 1623 nt4.18□□□□□ -1.74
RPB11P38902 PRP45YAL032C 1140 nt4.18□□□□□ -1.74
RPB11P38902 YOR111WYOR111W 699 nt4.18□□□□□ -1.74
RPB11P38902 GRE1YPL223C 507 nt4.18□□□□□ -1.74
RPB11P38902 PRP43YGL120C 2304 nt4.18□□□□□ -1.74
RPB11P38902 AXL2YIL140W 2472 nt4.18□□□□□ -1.74
RPB11P38902 TFC7YOR110W 1308 nt4.18□□□□□ -1.74
RPB11P38902 RSC6YCR052W 1452 nt4.18□□□□□ -1.74
RPB11P38902 ELP3YPL086C 1674 nt4.17□□□□□ -1.74
RPB11P38902 YNL097W-AYNL097W-A 156 nt4.17□□□□□ -1.74
RPB11P38902 CDC28YBR160W 897 nt4.17□□□□□ -1.74
RPB11P38902 YJL206CYJL206C 2277 nt4.17□□□□□ -1.74
RPB11P38902 ARN1YHL040C 1884 nt4.17□□□□□ -1.74
RPB11P38902 YMD8YML038C 1329 nt4.17□□□□□ -1.74
RPB11P38902 YGR125WYGR125W 3111 nt4.17□□□□□ -1.74
RPB11P38902 MAK32YCR019W 1092 nt4.16□□□□□ -1.74
RPB11P38902 LHP1YDL051W 828 nt4.16□□□□□ -1.74
RPB11P38902 YEL075W-AYEL075W-A 612 nt4.16□□□□□ -1.74
RPB11P38902 YLR463CYLR463C 552 nt4.16□□□□□ -1.74
RPB11P38902 QCR2YPR191W 1107 nt4.16□□□□□ -1.74
RPB11P38902 MRK1YDL079C 1506 nt4.16□□□□□ -1.74
RPB11P38902 CRT10YOL063C 2874 nt4.15□□□□□ -1.74
RPB11P38902 TEF4YKL081W 1239 nt4.15□□□□□ -1.75
RPB11P38902 MSC7YHR039C 1935 nt4.15□□□□□ -1.75
RPB11P38902 HOF1YMR032W 2010 nt4.14□□□□□ -1.75
RPB11P38902 RPT1YKL145W 1404 nt4.14□□□□□ -1.75
RPB11P38902 FAA3YIL009W 2085 nt4.14□□□□□ -1.75
RPB11P38902 MNS1YJR131W 1650 nt4.14□□□□□ -1.75
RPB11P38902 MBP1YDL056W 2502 nt4.14□□□□□ -1.75
RPB11P38902 ERD1YDR414C 1089 nt4.14□□□□□ -1.75
RPB11P38902 YPT32YGL210W 669 nt4.14□□□□□ -1.75
RPB11P38902 PGM2YMR105C 1710 nt4.14□□□□□ -1.75
RPB11P38902 UBX7YBR273C 1311 nt4.14□□□□□ -1.75
RPB11P38902 ULA1YPL003W 1389 nt4.14□□□□□ -1.75
RPB11P38902 PEX29YDR479C 1665 nt4.13□□□□□ -1.75
RPB11P38902 KRE6YPR159W 2163 nt4.13□□□□□ -1.75
RPB11P38902 SHM1YBR263W 1473 nt4.13□□□□□ -1.75
RPB11P38902 PAP1YKR002W 1707 nt4.13□□□□□ -1.75
RPB11P38902 PMP3YDR276C 168 nt4.13□□□□□ -1.75
RPB11P38902 YLR157W-EYLR157W-E 165 nt4.13□□□□□ -1.75
RPB11P38902 CDC21YOR074C 915 nt4.13□□□□□ -1.75
RPB11P38902 EMP46YLR080W 1335 nt4.13□□□□□ -1.75
RPB11P38902 HPC2YBR215W 1878 nt4.13□□□□□ -1.75
RPB11P38902 SFI1YLL003W 2841 nt4.12□□□□□ -1.75
RPB11P38902 RPS16BYDL083C 432 nt4.12□□□□□ -1.75
RPB11P38902 RPL12AYEL054C 498 nt4.12□□□□□ -1.75
RPB11P38902 RMR1YGL250W 726 nt4.12□□□□□ -1.75
RPB11P38902 PAN6YIL145C 930 nt4.12□□□□□ -1.75
RPB11P38902 COG5YNL051W 1212 nt4.12□□□□□ -1.75
RPB11P38902 MNT2YGL257C 1677 nt4.12□□□□□ -1.75
RPB11P38902 BRE2YLR015W 1518 nt4.11□□□□□ -1.75
RPB11P38902 VPS72YDR485C 2388 nt4.11□□□□□ -1.75
RPB11P38902 ATH1YPR026W 3636 nt4.11□□□□□ -1.75
RPB11P38902 GIP2YER054C 1647 nt4.11□□□□□ -1.75
RPB11P38902 MSH1YHR120W 2880 nt4.11□□□□□ -1.75
RPB11P38902 YHR045WYHR045W 1683 nt4.11□□□□□ -1.75
RPB11P38902 YCR047W-AYCR047W-A 207 nt4.11□□□□□ -1.75
RPB11P38902 YDR154CYDR154C 351 nt4.11□□□□□ -1.75
RPB11P38902 TFB3YDR460W 966 nt4.11□□□□□ -1.75
RPB11P38902 MIM2YLR099W-A 264 nt4.11□□□□□ -1.75
RPB11P38902 YML131WYML131W 1098 nt4.11□□□□□ -1.75
RPB11P38902 PIN2YOR104W 849 nt4.11□□□□□ -1.75
RPB11P38902 PMA1YGL008C 2757 nt4.11□□□□□ -1.75
RPB11P38902 FHL1YPR104C 2811 nt4.11□□□□□ -1.75
RPB11P38902 ROT2YBR229C 2865 nt4.11□□□□□ -1.75
RPB11P38902 GPR1YDL035C 2886 nt4.1□□□□□ -1.75
RPB11P38902 YEL045CYEL045C 426 nt4.1□□□□□ -1.75
RPB11P38902 SEC13YLR208W 894 nt4.1□□□□□ -1.75
RPB11P38902 ETT1YOR051C 1239 nt4.1□□□□□ -1.75
RPB11P38902 MRPL36YBR122C 534 nt4.1□□□□□ -1.75
RPB11P38902 YBR126W-AYBR126W-A 207 nt4.1□□□□□ -1.75
RPB11P38902 YCL012CYCL012C 405 nt4.1□□□□□ -1.75
RPB11P38902 CDC19YAL038W 1503 nt4.1□□□□□ -1.75
RPB11P38902 ASK10YGR097W 3441 nt4.09□□□□□ -1.75
RPB11P38902 ATG20YDL113C 1923 nt4.09□□□□□ -1.75
RPB11P38902 MOG1YJR074W 657 nt4.09□□□□□ -1.75
RPB11P38902 SNO4YMR322C 714 nt4.09□□□□□ -1.75
RPB11P38902 HSP33YOR391C 714 nt4.09□□□□□ -1.75
RPB11P38902 YPL136WYPL136W 369 nt4.09□□□□□ -1.75
RPB11P38902 HSP32YPL280W 714 nt4.09□□□□□ -1.75
RPB11P38902 PUF3YLL013C 2640 nt4.08□□□□□ -1.76
RPB11P38902 SLC1YDL052C 912 nt4.08□□□□□ -1.76
RPB11P38902 DFM1YDR411C 1026 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)CtN(GUU)C 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)FtN(GUU)F 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)GtN(GUU)G 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)KtN(GUU)K 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)LtN(GUU)L 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)N1tN(GUU)N1 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)N2tN(GUU)N2 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)O1tN(GUU)O1 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)O2tN(GUU)O2 74 nt4.08□□□□□ -1.76
RPB11P38902 tN(GUU)PtN(GUU)P 74 nt4.08□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms