Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TMEM253P0C7T8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 AC087393.1-201ENST00000582896 145 ntBASIC24.59■■□□□ 1.53
TMEM253P0C7T8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEM253P0C7T8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM253P0C7T8 DUSP8P5-201ENST00000422884 1815 ntBASIC24.58■■□□□ 1.53
TMEM253P0C7T8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TMEM253P0C7T8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
TMEM253P0C7T8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.58■■□□□ 1.52
TMEM253P0C7T8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TMEM253P0C7T8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.58■■□□□ 1.52
TMEM253P0C7T8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.58■■□□□ 1.52
TMEM253P0C7T8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.57■■□□□ 1.52
TMEM253P0C7T8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.57■■□□□ 1.52
TMEM253P0C7T8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM253P0C7T8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM253P0C7T8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.57■■□□□ 1.52
TMEM253P0C7T8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM253P0C7T8 AC090877.2-201ENST00000558441 1738 ntBASIC24.57■■□□□ 1.52
TMEM253P0C7T8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TMEM253P0C7T8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM253P0C7T8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM253P0C7T8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM253P0C7T8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
TMEM253P0C7T8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM253P0C7T8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TMEM253P0C7T8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TMEM253P0C7T8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM253P0C7T8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.55■■□□□ 1.52
TMEM253P0C7T8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM253P0C7T8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM253P0C7T8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TMEM253P0C7T8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
TMEM253P0C7T8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM253P0C7T8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
TMEM253P0C7T8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.54■■□□□ 1.52
TMEM253P0C7T8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.54■■□□□ 1.52
TMEM253P0C7T8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM253P0C7T8 MIR6765-201ENST00000614092 87 ntBASIC24.54■■□□□ 1.52
TMEM253P0C7T8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM253P0C7T8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TMEM253P0C7T8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 AL592295.1-201ENST00000400984 884 ntBASIC24.53■■□□□ 1.52
TMEM253P0C7T8 DUX4L9-201ENST00000449051 1259 ntBASIC24.53■■□□□ 1.52
TMEM253P0C7T8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
TMEM253P0C7T8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.52■■□□□ 1.52
TMEM253P0C7T8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TMEM253P0C7T8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 AC012676.1-201ENST00000574705 1949 ntBASIC24.51■■□□□ 1.51
TMEM253P0C7T8 AC133561.1-201ENST00000568600 2415 ntBASIC24.51■■□□□ 1.51
TMEM253P0C7T8 AC068473.5-201ENST00000616428 2072 ntBASIC24.51■■□□□ 1.51
TMEM253P0C7T8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 RARRES2P2-201ENST00000394842 485 ntBASIC24.51■■□□□ 1.51
TMEM253P0C7T8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.51■■□□□ 1.51
TMEM253P0C7T8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms