Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 SSO1YPL232W 873 nt5.54□□□□□ -1.52
RAD3P06839 TIM54YJL054W 1437 nt5.54□□□□□ -1.52
RAD3P06839 UTP7YER082C 1665 nt5.53□□□□□ -1.52
RAD3P06839 SEC39YLR440C 2130 nt5.53□□□□□ -1.52
RAD3P06839 SIF2YBR103W 1608 nt5.53□□□□□ -1.52
RAD3P06839 MMP1YLL061W 1752 nt5.53□□□□□ -1.52
RAD3P06839 VAM7YGL212W 951 nt5.53□□□□□ -1.52
RAD3P06839 MRPL13YKR006C 795 nt5.53□□□□□ -1.52
RAD3P06839 YBR126W-AYBR126W-A 207 nt5.53□□□□□ -1.52
RAD3P06839 NOB1YOR056C 1380 nt5.53□□□□□ -1.52
RAD3P06839 YGR125WYGR125W 3111 nt5.52□□□□□ -1.53
RAD3P06839 BPL1YDL141W 2073 nt5.52□□□□□ -1.53
RAD3P06839 YGL194C-AYGL194C-A 243 nt5.52□□□□□ -1.53
RAD3P06839 YML101C-AYML101C-A 318 nt5.52□□□□□ -1.53
RAD3P06839 TEF1YPR080W 1377 nt5.52□□□□□ -1.53
RAD3P06839 TEF2YBR118W 1377 nt5.52□□□□□ -1.53
RAD3P06839 TRK2YKR050W 2670 nt5.51□□□□□ -1.53
RAD3P06839 PSE1YMR308C 3270 nt5.51□□□□□ -1.53
RAD3P06839 LUC7YDL087C 786 nt5.51□□□□□ -1.53
RAD3P06839 COX26YDR119W-A 201 nt5.51□□□□□ -1.53
RAD3P06839 NPY1YGL067W 1155 nt5.51□□□□□ -1.53
RAD3P06839 HSX1tR(CCU)J 72 nt5.51□□□□□ -1.53
RAD3P06839 UTP9YHR196W 1728 nt5.51□□□□□ -1.53
RAD3P06839 SEC18YBR080C 2277 nt5.5□□□□□ -1.53
RAD3P06839 TUP1YCR084C 2142 nt5.5□□□□□ -1.53
RAD3P06839 OST3YOR085W 1053 nt5.5□□□□□ -1.53
RAD3P06839 YBR230W-AYBR230W-A 201 nt5.5□□□□□ -1.53
RAD3P06839 TOS3YGL179C 1683 nt5.5□□□□□ -1.53
RAD3P06839 UGO1YDR470C 1509 nt5.49□□□□□ -1.53
RAD3P06839 AAD4YDL243C 990 nt5.49□□□□□ -1.53
RAD3P06839 MHR1YDR296W 681 nt5.49□□□□□ -1.53
RAD3P06839 CAD1YDR423C 1230 nt5.49□□□□□ -1.53
RAD3P06839 MPM1YJL066C 759 nt5.49□□□□□ -1.53
RAD3P06839 YKL151CYKL151C 1014 nt5.49□□□□□ -1.53
RAD3P06839 YOL097W-AYOL097W-A 186 nt5.49□□□□□ -1.53
RAD3P06839 BRF1YGR246C 1791 nt5.49□□□□□ -1.53
RAD3P06839 NUD1YOR373W 2556 nt5.48□□□□□ -1.53
RAD3P06839 ENP1YBR247C 1452 nt5.48□□□□□ -1.53
RAD3P06839 YNL108CYNL108C 813 nt5.48□□□□□ -1.53
RAD3P06839 YNR042WYNR042W 429 nt5.48□□□□□ -1.53
RAD3P06839 PRP43YGL120C 2304 nt5.48□□□□□ -1.53
RAD3P06839 HAP1YLR256W 4509 nt5.48□□□□□ -1.53
RAD3P06839 VAN1YML115C 1608 nt5.48□□□□□ -1.53
RAD3P06839 HRP1YOL123W 1605 nt5.48□□□□□ -1.53
RAD3P06839 DRS1YLL008W 2259 nt5.48□□□□□ -1.53
RAD3P06839 YDR541CYDR541C 1035 nt5.47□□□□□ -1.53
RAD3P06839 SLO1YER180C-A 258 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)CtN(GUU)C 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)FtN(GUU)F 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)GtN(GUU)G 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)KtN(GUU)K 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)LtN(GUU)L 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)N1tN(GUU)N1 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)N2tN(GUU)N2 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)O1tN(GUU)O1 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)O2tN(GUU)O2 74 nt5.47□□□□□ -1.53
RAD3P06839 tN(GUU)PtN(GUU)P 74 nt5.47□□□□□ -1.53
RAD3P06839 COX17YLL009C 210 nt5.47□□□□□ -1.53
RAD3P06839 TPS3YMR261C 3165 nt5.47□□□□□ -1.53
RAD3P06839 YJR015WYJR015W 1533 nt5.47□□□□□ -1.53
RAD3P06839 YAL056C-AYAL056C-A 351 nt5.46□□□□□ -1.54
RAD3P06839 COS9YKL219W 1224 nt5.46□□□□□ -1.54
RAD3P06839 CTR3YLR411W 726 nt5.46□□□□□ -1.54
RAD3P06839 YMR010WYMR010W 1218 nt5.46□□□□□ -1.54
RAD3P06839 SAM4YPL273W 978 nt5.46□□□□□ -1.54
RAD3P06839 YFL034WYFL034W 3222 nt5.46□□□□□ -1.54
RAD3P06839 UGA1YGR019W 1416 nt5.46□□□□□ -1.54
RAD3P06839 CCZ1YBR131W 2115 nt5.45□□□□□ -1.54
RAD3P06839 GET3YDL100C 1065 nt5.45□□□□□ -1.54
RAD3P06839 VPS72YDR485C 2388 nt5.45□□□□□ -1.54
RAD3P06839 RRP45YDR280W 918 nt5.44□□□□□ -1.54
RAD3P06839 CAX4YGR036C 720 nt5.44□□□□□ -1.54
RAD3P06839 YNR048WYNR048W 1182 nt5.44□□□□□ -1.54
RAD3P06839 CBC2YPL178W 627 nt5.44□□□□□ -1.54
RAD3P06839 YTH1YPR107C 627 nt5.44□□□□□ -1.54
RAD3P06839 STE50YCL032W 1041 nt5.44□□□□□ -1.54
RAD3P06839 STE20YHL007C 2820 nt5.44□□□□□ -1.54
RAD3P06839 ARO10YDR380W 1908 nt5.44□□□□□ -1.54
RAD3P06839 YGL036WYGL036W 2730 nt5.44□□□□□ -1.54
RAD3P06839 NDC1YML031W 1968 nt5.44□□□□□ -1.54
RAD3P06839 SNT2YGL131C 4212 nt5.43□□□□□ -1.54
RAD3P06839 DED81YHR019C 1665 nt5.43□□□□□ -1.54
RAD3P06839 QDR1YIL120W 1692 nt5.43□□□□□ -1.54
RAD3P06839 DFG5YMR238W 1377 nt5.43□□□□□ -1.54
RAD3P06839 SHE10YGL228W 1734 nt5.43□□□□□ -1.54
RAD3P06839 MGS1YNL218W 1764 nt5.43□□□□□ -1.54
RAD3P06839 RPT6YGL048C 1218 nt5.43□□□□□ -1.54
RAD3P06839 YLL059CYLL059C 507 nt5.43□□□□□ -1.54
RAD3P06839 PGA3YML125C 939 nt5.43□□□□□ -1.54
RAD3P06839 MRP21YBL090W 534 nt5.43□□□□□ -1.54
RAD3P06839 YOR318CYOR318C 306 nt5.43□□□□□ -1.54
RAD3P06839 TFC7YOR110W 1308 nt5.43□□□□□ -1.54
RAD3P06839 IES1YFL013C 2079 nt5.43□□□□□ -1.54
RAD3P06839 YDL034WYDL034W 345 nt5.42□□□□□ -1.54
RAD3P06839 ORM1YGR038W 669 nt5.42□□□□□ -1.54
RAD3P06839 YJL107CYJL107C 1164 nt5.42□□□□□ -1.54
RAD3P06839 APN1YKL114C 1104 nt5.42□□□□□ -1.54
RAD3P06839 SKG1YKR100C 1068 nt5.42□□□□□ -1.54
RAD3P06839 LEM3YNL323W 1245 nt5.42□□□□□ -1.54
RAD3P06839 YOR024WYOR024W 324 nt5.42□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms