Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.15■■■□□ 2.58
COL5A2P05997 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
COL5A2P05997 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.15■■■□□ 2.58
COL5A2P05997 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
COL5A2P05997 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL5A2P05997 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL5A2P05997 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
COL5A2P05997 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
COL5A2P05997 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL5A2P05997 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
COL5A2P05997 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.14■■■□□ 2.58
COL5A2P05997 AC096887.2-201ENST00000623443 1957 ntBASIC31.14■■■□□ 2.58
COL5A2P05997 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.14■■■□□ 2.57
COL5A2P05997 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
COL5A2P05997 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
COL5A2P05997 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
COL5A2P05997 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
COL5A2P05997 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.13■■■□□ 2.57
COL5A2P05997 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
COL5A2P05997 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL5A2P05997 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL5A2P05997 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
COL5A2P05997 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
COL5A2P05997 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.12■■■□□ 2.57
COL5A2P05997 CA15P2-201ENST00000611168 834 ntBASIC31.12■■■□□ 2.57
COL5A2P05997 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL5A2P05997 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL5A2P05997 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
COL5A2P05997 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL5A2P05997 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL5A2P05997 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.11■■■□□ 2.57
COL5A2P05997 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.11■■■□□ 2.57
COL5A2P05997 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL5A2P05997 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL5A2P05997 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL5A2P05997 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL5A2P05997 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.1■■■□□ 2.57
COL5A2P05997 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.1■■■□□ 2.57
COL5A2P05997 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.1■■■□□ 2.57
COL5A2P05997 SERBP1P1-201ENST00000396021 1160 ntBASIC31.09■■■□□ 2.57
COL5A2P05997 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
COL5A2P05997 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.08■■■□□ 2.57
COL5A2P05997 RASA4CP-201ENST00000424092 1398 ntBASIC31.08■■■□□ 2.57
COL5A2P05997 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.08■■■□□ 2.57
COL5A2P05997 SYT6-210ENST00000641643 1587 ntBASIC31.08■■■□□ 2.57
COL5A2P05997 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.08■■■□□ 2.57
COL5A2P05997 AC005703.6-201ENST00000623265 1329 ntBASIC31.08■■■□□ 2.57
COL5A2P05997 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
COL5A2P05997 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
COL5A2P05997 AC027682.1-201ENST00000562846 899 ntBASIC31.08■■■□□ 2.57
COL5A2P05997 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
COL5A2P05997 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL5A2P05997 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL5A2P05997 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL5A2P05997 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
COL5A2P05997 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
COL5A2P05997 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.06■■■□□ 2.56
COL5A2P05997 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL5A2P05997 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL5A2P05997 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.06■■■□□ 2.56
COL5A2P05997 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.05■■■□□ 2.56
COL5A2P05997 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL5A2P05997 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
COL5A2P05997 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
COL5A2P05997 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.05■■■□□ 2.56
COL5A2P05997 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL5A2P05997 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.05■■■□□ 2.56
COL5A2P05997 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
COL5A2P05997 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.04■■■□□ 2.56
COL5A2P05997 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.04■■■□□ 2.56
COL5A2P05997 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
COL5A2P05997 AC142086.6-201ENST00000621154 1765 ntBASIC31.03■■■□□ 2.56
COL5A2P05997 AC097639.1-201ENST00000565519 1891 ntBASIC31.03■■■□□ 2.56
COL5A2P05997 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
COL5A2P05997 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
COL5A2P05997 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.02■■■□□ 2.56
COL5A2P05997 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
COL5A2P05997 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.02■■■□□ 2.56
COL5A2P05997 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
COL5A2P05997 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
COL5A2P05997 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
COL5A2P05997 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
COL5A2P05997 AC092171.4-201ENST00000609130 632 ntBASIC31.01■■■□□ 2.56
COL5A2P05997 AC011298.3-201ENST00000615796 283 ntBASIC31.01■■■□□ 2.56
COL5A2P05997 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.01■■■□□ 2.55
COL5A2P05997 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
COL5A2P05997 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
COL5A2P05997 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
COL5A2P05997 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
COL5A2P05997 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
COL5A2P05997 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
COL5A2P05997 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31■■■□□ 2.55
COL5A2P05997 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31■■■□□ 2.55
COL5A2P05997 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31■■■□□ 2.55
COL5A2P05997 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
COL5A2P05997 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
COL5A2P05997 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
COL5A2P05997 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
COL5A2P05997 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC30.99■■■□□ 2.55
COL5A2P05997 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms