Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 MIR6089-201ENST00000616698 64 ntBASIC19.76■□□□□ 0.75
TCRBP04435 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.76■□□□□ 0.75
TCRBP04435 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TCRBP04435 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 GUSBP5-202ENST00000510805 1989 ntBASIC19.75■□□□□ 0.75
TCRBP04435 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.75■□□□□ 0.75
TCRBP04435 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.75■□□□□ 0.75
TCRBP04435 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TCRBP04435 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TCRBP04435 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TCRBP04435 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBP04435 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBP04435 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.74■□□□□ 0.75
TCRBP04435 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBP04435 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TCRBP04435 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TCRBP04435 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TCRBP04435 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBP04435 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TCRBP04435 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TCRBP04435 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.74■□□□□ 0.75
TCRBP04435 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.73■□□□□ 0.75
TCRBP04435 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.73■□□□□ 0.75
TCRBP04435 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TCRBP04435 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.73■□□□□ 0.75
TCRBP04435 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBP04435 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBP04435 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBP04435 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBP04435 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBP04435 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBP04435 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBP04435 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBP04435 ECEL1P1-201ENST00000373592 1742 ntBASIC19.71■□□□□ 0.75
TCRBP04435 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TCRBP04435 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBP04435 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TCRBP04435 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.71■□□□□ 0.75
TCRBP04435 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.71■□□□□ 0.75
TCRBP04435 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.71■□□□□ 0.75
TCRBP04435 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.71■□□□□ 0.75
TCRBP04435 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBP04435 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBP04435 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TCRBP04435 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBP04435 AL359504.2-201ENST00000605506 1601 ntBASIC19.7■□□□□ 0.74
TCRBP04435 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBP04435 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBP04435 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TCRBP04435 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBP04435 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBP04435 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.69■□□□□ 0.74
TCRBP04435 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBP04435 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBP04435 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBP04435 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.69■□□□□ 0.74
TCRBP04435 AC136428.2-201ENST00000563187 214 ntBASIC19.69■□□□□ 0.74
TCRBP04435 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.69■□□□□ 0.74
TCRBP04435 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBP04435 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBP04435 FOXO3B-201ENST00000395675 1928 ntBASIC19.68■□□□□ 0.74
TCRBP04435 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TCRBP04435 HLA-L-211ENST00000482052 1765 ntBASIC19.68■□□□□ 0.74
TCRBP04435 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.68■□□□□ 0.74
TCRBP04435 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.68■□□□□ 0.74
TCRBP04435 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBP04435 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBP04435 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBP04435 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBP04435 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TCRBP04435 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.68■□□□□ 0.74
TCRBP04435 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TCRBP04435 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBP04435 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TCRBP04435 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBP04435 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBP04435 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TCRBP04435 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TCRBP04435 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.67■□□□□ 0.74
TCRBP04435 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
TCRBP04435 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBP04435 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TCRBP04435 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TCRBP04435 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms