Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SOD1P00441 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SOD1P00441 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SOD1P00441 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
SOD1P00441 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.04■■□□□ 1.28
SOD1P00441 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.04■■□□□ 1.28
SOD1P00441 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SOD1P00441 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SOD1P00441 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SOD1P00441 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SOD1P00441 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SOD1P00441 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
SOD1P00441 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SOD1P00441 AL356441.2-201ENST00000443009 864 ntBASIC23.03■■□□□ 1.28
SOD1P00441 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.03■■□□□ 1.28
SOD1P00441 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.03■■□□□ 1.28
SOD1P00441 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SOD1P00441 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SOD1P00441 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SOD1P00441 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SOD1P00441 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SOD1P00441 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.02■■□□□ 1.28
SOD1P00441 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.02■■□□□ 1.28
SOD1P00441 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.02■■□□□ 1.28
SOD1P00441 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.02■■□□□ 1.28
SOD1P00441 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SOD1P00441 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.02■■□□□ 1.28
SOD1P00441 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.02■■□□□ 1.28
SOD1P00441 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SOD1P00441 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SOD1P00441 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SOD1P00441 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.01■■□□□ 1.27
SOD1P00441 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.01■■□□□ 1.27
SOD1P00441 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SOD1P00441 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.01■■□□□ 1.27
SOD1P00441 AC135731.1-201ENST00000569415 2548 ntBASIC23.01■■□□□ 1.27
SOD1P00441 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SOD1P00441 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23■■□□□ 1.27
SOD1P00441 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SOD1P00441 AC138932.3-201ENST00000567634 1902 ntBASIC23■■□□□ 1.27
SOD1P00441 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23■■□□□ 1.27
SOD1P00441 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23■■□□□ 1.27
SOD1P00441 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SOD1P00441 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
SOD1P00441 TSPY9P-201ENST00000440215 945 ntBASIC23■■□□□ 1.27
SOD1P00441 TSPY11P-201ENST00000442607 1045 ntBASIC23■■□□□ 1.27
SOD1P00441 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23■■□□□ 1.27
SOD1P00441 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SOD1P00441 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
SOD1P00441 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23■■□□□ 1.27
SOD1P00441 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SOD1P00441 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SOD1P00441 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
SOD1P00441 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SOD1P00441 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.99■■□□□ 1.27
SOD1P00441 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SOD1P00441 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.99■■□□□ 1.27
SOD1P00441 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SOD1P00441 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SOD1P00441 AC142381.3-201ENST00000568208 1670 ntBASIC22.99■■□□□ 1.27
SOD1P00441 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SOD1P00441 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SOD1P00441 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.98■■□□□ 1.27
SOD1P00441 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SOD1P00441 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SOD1P00441 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.98■■□□□ 1.27
SOD1P00441 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.98■■□□□ 1.27
SOD1P00441 SNX5-217ENST00000606557 1087 ntBASIC22.98■■□□□ 1.27
SOD1P00441 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.98■■□□□ 1.27
SOD1P00441 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SOD1P00441 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SOD1P00441 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SOD1P00441 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.97■■□□□ 1.27
SOD1P00441 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.97■■□□□ 1.27
SOD1P00441 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.97■■□□□ 1.27
SOD1P00441 HLA-L-211ENST00000482052 1765 ntBASIC22.97■■□□□ 1.27
SOD1P00441 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.97■■□□□ 1.27
SOD1P00441 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SOD1P00441 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SOD1P00441 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SOD1P00441 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SOD1P00441 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.97■■□□□ 1.27
SOD1P00441 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.97■■□□□ 1.27
SOD1P00441 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SOD1P00441 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SOD1P00441 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOD1P00441 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SOD1P00441 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOD1P00441 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOD1P00441 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOD1P00441 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
SOD1P00441 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.96■■□□□ 1.27
SOD1P00441 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SOD1P00441 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOD1P00441 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SOD1P00441 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SOD1P00441 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
SOD1P00441 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SOD1P00441 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SOD1P00441 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms