Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIX6O95475 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIX6O95475 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIX6O95475 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX6O95475 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX6O95475 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIX6O95475 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX6O95475 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.39■□□□□ 0.69
SIX6O95475 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX6O95475 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIX6O95475 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX6O95475 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX6O95475 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX6O95475 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX6O95475 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX6O95475 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SIX6O95475 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SIX6O95475 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.38■□□□□ 0.69
SIX6O95475 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 LINC00526-201ENST00000581067 1875 ntBASIC19.37■□□□□ 0.69
SIX6O95475 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX6O95475 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.37■□□□□ 0.69
SIX6O95475 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX6O95475 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.37■□□□□ 0.69
SIX6O95475 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.37■□□□□ 0.69
SIX6O95475 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX6O95475 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIX6O95475 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX6O95475 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX6O95475 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX6O95475 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX6O95475 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX6O95475 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX6O95475 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX6O95475 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX6O95475 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX6O95475 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX6O95475 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX6O95475 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX6O95475 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX6O95475 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX6O95475 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX6O95475 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX6O95475 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX6O95475 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX6O95475 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX6O95475 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX6O95475 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX6O95475 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SIX6O95475 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX6O95475 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX6O95475 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX6O95475 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SIX6O95475 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX6O95475 AC097358.2-201ENST00000607541 1159 ntBASIC19.34■□□□□ 0.69
SIX6O95475 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
SIX6O95475 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX6O95475 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX6O95475 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SIX6O95475 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SIX6O95475 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SIX6O95475 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX6O95475 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX6O95475 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX6O95475 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX6O95475 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.33■□□□□ 0.68
SIX6O95475 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX6O95475 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
SIX6O95475 AL359504.2-201ENST00000605506 1601 ntBASIC19.33■□□□□ 0.68
SIX6O95475 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SIX6O95475 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX6O95475 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX6O95475 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX6O95475 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SIX6O95475 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX6O95475 AC137767.1-201ENST00000602918 1920 ntBASIC19.32■□□□□ 0.68
SIX6O95475 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SIX6O95475 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX6O95475 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX6O95475 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SIX6O95475 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX6O95475 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX6O95475 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SIX6O95475 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX6O95475 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SIX6O95475 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX6O95475 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX6O95475 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX6O95475 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.31■□□□□ 0.68
SIX6O95475 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.31■□□□□ 0.68
SIX6O95475 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX6O95475 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SIX6O95475 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms