Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.06■■□□□ 1.76
TNRC18O15417 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TNRC18O15417 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TNRC18O15417 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TNRC18O15417 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.06■■□□□ 1.76
TNRC18O15417 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.06■■□□□ 1.76
TNRC18O15417 CCDC92B-201ENST00000575506 885 ntBASIC26.06■■□□□ 1.76
TNRC18O15417 AC008687.6-201ENST00000596318 630 ntBASIC26.05■■□□□ 1.76
TNRC18O15417 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.04■■□□□ 1.76
TNRC18O15417 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TNRC18O15417 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TNRC18O15417 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.04■■□□□ 1.76
TNRC18O15417 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
TNRC18O15417 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TNRC18O15417 AC080038.1-201ENST00000611274 1154 ntBASIC26.04■■□□□ 1.76
TNRC18O15417 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TNRC18O15417 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
TNRC18O15417 ABCB10P3-201ENST00000561950 2166 ntBASIC26.03■■□□□ 1.76
TNRC18O15417 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TNRC18O15417 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TNRC18O15417 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
TNRC18O15417 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TNRC18O15417 AC006015.1-201ENST00000429970 570 ntBASIC26.02■■□□□ 1.76
TNRC18O15417 CROCCP5-201ENST00000436658 830 ntBASIC26.02■■□□□ 1.76
TNRC18O15417 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.02■■□□□ 1.76
TNRC18O15417 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TNRC18O15417 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TNRC18O15417 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TNRC18O15417 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
TNRC18O15417 KRT18P14-201ENST00000534205 1250 ntBASIC26.01■■□□□ 1.75
TNRC18O15417 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
TNRC18O15417 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TNRC18O15417 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TNRC18O15417 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TNRC18O15417 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
TNRC18O15417 NCF1B-203ENST00000435988 1254 ntBASIC26■■□□□ 1.75
TNRC18O15417 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26■■□□□ 1.75
TNRC18O15417 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26■■□□□ 1.75
TNRC18O15417 TERF1P2-201ENST00000583350 1212 ntBASIC26■■□□□ 1.75
TNRC18O15417 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26■■□□□ 1.75
TNRC18O15417 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.99■■□□□ 1.75
TNRC18O15417 MIR6722-201ENST00000617286 78 ntBASIC25.98■■□□□ 1.75
TNRC18O15417 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TNRC18O15417 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
TNRC18O15417 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TNRC18O15417 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TNRC18O15417 AL358852.1-201ENST00000623174 1268 ntBASIC25.98■■□□□ 1.75
TNRC18O15417 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TNRC18O15417 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.98■■□□□ 1.75
TNRC18O15417 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
TNRC18O15417 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.98■■□□□ 1.75
TNRC18O15417 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
TNRC18O15417 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.97■■□□□ 1.75
TNRC18O15417 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.97■■□□□ 1.75
TNRC18O15417 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.97■■□□□ 1.75
TNRC18O15417 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.97■■□□□ 1.75
TNRC18O15417 KRT18P6-201ENST00000555540 1265 ntBASIC25.97■■□□□ 1.75
TNRC18O15417 AL109923.1-201ENST00000618799 583 ntBASIC25.97■■□□□ 1.75
TNRC18O15417 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TNRC18O15417 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
TNRC18O15417 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNRC18O15417 AL138724.1-201ENST00000606771 1088 ntBASIC25.96■■□□□ 1.75
TNRC18O15417 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
TNRC18O15417 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNRC18O15417 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TNRC18O15417 NTF6G-201ENST00000591094 616 ntBASIC25.96■■□□□ 1.75
TNRC18O15417 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.96■■□□□ 1.75
TNRC18O15417 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNRC18O15417 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
TNRC18O15417 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.95■■□□□ 1.75
TNRC18O15417 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
TNRC18O15417 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TNRC18O15417 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.95■■□□□ 1.74
TNRC18O15417 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
TNRC18O15417 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
TNRC18O15417 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TNRC18O15417 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TNRC18O15417 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
TNRC18O15417 AC136469.2-201ENST00000623944 1028 ntBASIC25.93■■□□□ 1.74
TNRC18O15417 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.93■■□□□ 1.74
TNRC18O15417 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
TNRC18O15417 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TNRC18O15417 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TNRC18O15417 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
TNRC18O15417 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TNRC18O15417 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
TNRC18O15417 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TNRC18O15417 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
TNRC18O15417 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.91■■□□□ 1.74
TNRC18O15417 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TNRC18O15417 AC142086.2-201ENST00000569753 217 ntBASIC25.91■■□□□ 1.74
TNRC18O15417 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.91■■□□□ 1.74
TNRC18O15417 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TNRC18O15417 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TNRC18O15417 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
TNRC18O15417 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TNRC18O15417 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.91■■□□□ 1.74
TNRC18O15417 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.91■■□□□ 1.74
TNRC18O15417 AC245100.8-202ENST00000629247 1058 ntBASIC25.91■■□□□ 1.74
TNRC18O15417 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms