Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC38.57■■■■□ 3.76
CHD1O14646 LBH-205ENST00000407930 756 ntTSL 2 BASIC38.57■■■■□ 3.76
CHD1O14646 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
CHD1O14646 YBX1P1-201ENST00000445822 960 ntBASIC38.56■■■■□ 3.76
CHD1O14646 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC38.56■■■■□ 3.76
CHD1O14646 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC38.56■■■■□ 3.76
CHD1O14646 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
CHD1O14646 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
CHD1O14646 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC38.55■■■■□ 3.76
CHD1O14646 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
CHD1O14646 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC38.54■■■■□ 3.76
CHD1O14646 ESRRAP2-201ENST00000418437 1549 ntBASIC38.54■■■■□ 3.76
CHD1O14646 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC38.53■■■■□ 3.76
CHD1O14646 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC38.53■■■■□ 3.76
CHD1O14646 AC092171.4-201ENST00000609130 632 ntBASIC38.53■■■■□ 3.76
CHD1O14646 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC38.53■■■■□ 3.76
CHD1O14646 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC38.52■■■■□ 3.76
CHD1O14646 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC38.52■■■■□ 3.76
CHD1O14646 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC38.52■■■■□ 3.76
CHD1O14646 AL138724.1-201ENST00000606771 1088 ntBASIC38.52■■■■□ 3.76
CHD1O14646 ME3-201ENST00000323418 1068 ntTSL 5 BASIC38.52■■■■□ 3.76
CHD1O14646 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC38.52■■■■□ 3.76
CHD1O14646 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC38.52■■■■□ 3.76
CHD1O14646 AC027612.3-201ENST00000413684 1047 ntBASIC38.52■■■■□ 3.76
CHD1O14646 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CHD1O14646 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC38.52■■■■□ 3.76
CHD1O14646 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC38.51■■■■□ 3.76
CHD1O14646 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC38.51■■■■□ 3.76
CHD1O14646 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
CHD1O14646 ABHD17AP1-201ENST00000358206 933 ntBASIC38.51■■■■□ 3.76
CHD1O14646 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
CHD1O14646 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
CHD1O14646 RAB43-208ENST00000615093 783 ntTSL 5 BASIC38.5■■■■□ 3.75
CHD1O14646 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC38.49■■■■□ 3.75
CHD1O14646 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
CHD1O14646 FOXO3B-201ENST00000395675 1928 ntBASIC38.49■■■■□ 3.75
CHD1O14646 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
CHD1O14646 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC38.48■■■■□ 3.75
CHD1O14646 DRD5P2-201ENST00000421395 2012 ntBASIC38.48■■■■□ 3.75
CHD1O14646 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
CHD1O14646 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
CHD1O14646 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
CHD1O14646 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC38.48■■■■□ 3.75
CHD1O14646 AC099791.2-201ENST00000605725 427 ntBASIC38.48■■■■□ 3.75
CHD1O14646 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC38.48■■■■□ 3.75
CHD1O14646 AC136469.2-201ENST00000623944 1028 ntBASIC38.48■■■■□ 3.75
CHD1O14646 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC38.47■■■■□ 3.75
CHD1O14646 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
CHD1O14646 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
CHD1O14646 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC38.46■■■■□ 3.75
CHD1O14646 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC38.45■■■■□ 3.75
CHD1O14646 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
CHD1O14646 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
CHD1O14646 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC38.45■■■■□ 3.75
CHD1O14646 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC38.44■■■■□ 3.74
CHD1O14646 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
CHD1O14646 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC38.44■■■■□ 3.74
CHD1O14646 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC38.44■■■■□ 3.74
CHD1O14646 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
CHD1O14646 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC38.44■■■■□ 3.74
CHD1O14646 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC38.43■■■■□ 3.74
CHD1O14646 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC38.43■■■■□ 3.74
CHD1O14646 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC38.43■■■■□ 3.74
CHD1O14646 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
CHD1O14646 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
CHD1O14646 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC38.42■■■■□ 3.74
CHD1O14646 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC38.42■■■■□ 3.74
CHD1O14646 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
CHD1O14646 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
CHD1O14646 AC005703.6-201ENST00000623265 1329 ntBASIC38.41■■■■□ 3.74
CHD1O14646 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC38.41■■■■□ 3.74
CHD1O14646 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
CHD1O14646 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
CHD1O14646 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC38.41■■■■□ 3.74
CHD1O14646 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC38.41■■■■□ 3.74
CHD1O14646 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
CHD1O14646 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC38.41■■■■□ 3.74
CHD1O14646 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC38.4■■■■□ 3.74
CHD1O14646 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC38.4■■■■□ 3.74
CHD1O14646 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC38.4■■■■□ 3.74
CHD1O14646 AC090877.2-201ENST00000558441 1738 ntBASIC38.39■■■■□ 3.74
CHD1O14646 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC38.39■■■■□ 3.74
CHD1O14646 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC38.39■■■■□ 3.74
CHD1O14646 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC38.39■■■■□ 3.74
CHD1O14646 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC38.39■■■■□ 3.74
CHD1O14646 SNX3-202ENST00000349379 890 ntTSL 2 BASIC38.39■■■■□ 3.74
CHD1O14646 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC38.39■■■■□ 3.74
CHD1O14646 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC38.39■■■■□ 3.74
CHD1O14646 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC38.39■■■■□ 3.74
CHD1O14646 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC38.39■■■■□ 3.74
CHD1O14646 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
CHD1O14646 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC38.38■■■■□ 3.74
CHD1O14646 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC38.38■■■■□ 3.74
CHD1O14646 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC38.38■■■■□ 3.73
CHD1O14646 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
CHD1O14646 MPST-208ENST00000628507 698 ntTSL 5 BASIC38.38■■■■□ 3.73
CHD1O14646 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
CHD1O14646 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
CHD1O14646 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC38.36■■■■□ 3.73
CHD1O14646 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC38.36■■■■□ 3.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms