Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDUFA4O00483 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.83■□□□□ 0.45
NDUFA4O00483 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NDUFA4O00483 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.83■□□□□ 0.45
NDUFA4O00483 AC093323.1-202ENST00000635031 2045 ntBASIC17.83■□□□□ 0.45
NDUFA4O00483 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NDUFA4O00483 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
NDUFA4O00483 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NDUFA4O00483 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NDUFA4O00483 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.83■□□□□ 0.44
NDUFA4O00483 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NDUFA4O00483 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NDUFA4O00483 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NDUFA4O00483 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.83■□□□□ 0.44
NDUFA4O00483 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA4O00483 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA4O00483 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA4O00483 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NDUFA4O00483 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA4O00483 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA4O00483 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA4O00483 KRT18P24-201ENST00000344739 1156 ntBASIC17.82■□□□□ 0.44
NDUFA4O00483 THA1P-201ENST00000590384 1145 ntBASIC17.82■□□□□ 0.44
NDUFA4O00483 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.82■□□□□ 0.44
NDUFA4O00483 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.82■□□□□ 0.44
NDUFA4O00483 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NDUFA4O00483 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA4O00483 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.81■□□□□ 0.44
NDUFA4O00483 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA4O00483 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA4O00483 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA4O00483 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
NDUFA4O00483 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA4O00483 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
NDUFA4O00483 YBX1P4-201ENST00000392794 808 ntBASIC17.81■□□□□ 0.44
NDUFA4O00483 AC120024.1-201ENST00000562672 995 ntBASIC17.81■□□□□ 0.44
NDUFA4O00483 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NDUFA4O00483 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA4O00483 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NDUFA4O00483 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NDUFA4O00483 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFA4O00483 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA4O00483 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA4O00483 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA4O00483 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFA4O00483 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.8■□□□□ 0.44
NDUFA4O00483 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NDUFA4O00483 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA4O00483 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA4O00483 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA4O00483 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA4O00483 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NDUFA4O00483 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.79■□□□□ 0.44
NDUFA4O00483 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFA4O00483 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.79■□□□□ 0.44
NDUFA4O00483 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA4O00483 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA4O00483 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
NDUFA4O00483 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFA4O00483 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFA4O00483 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NDUFA4O00483 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NDUFA4O00483 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.78■□□□□ 0.44
NDUFA4O00483 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFA4O00483 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFA4O00483 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFA4O00483 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 AL161729.1-201ENST00000604104 1402 ntBASIC17.78■□□□□ 0.44
NDUFA4O00483 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFA4O00483 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA4O00483 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA4O00483 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA4O00483 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA4O00483 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFA4O00483 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDUFA4O00483 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDUFA4O00483 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.77■□□□□ 0.43
NDUFA4O00483 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA4O00483 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA4O00483 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA4O00483 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.76■□□□□ 0.43
NDUFA4O00483 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA4O00483 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFA4O00483 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA4O00483 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA4O00483 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA4O00483 KRT8P33-201ENST00000508125 1423 ntBASIC17.75■□□□□ 0.43
NDUFA4O00483 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.75■□□□□ 0.43
NDUFA4O00483 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NDUFA4O00483 AC103834.1-201ENST00000520383 144 ntBASIC17.75■□□□□ 0.43
NDUFA4O00483 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFA4O00483 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NDUFA4O00483 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms