Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC020928.2-201ENST00000588717 2197 ntBASIC23.13■■□□□ 1.29
H3BM21 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
H3BM21 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.12■■□□□ 1.29
H3BM21 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
H3BM21 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.12■■□□□ 1.29
H3BM21 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.12■■□□□ 1.29
H3BM21 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.12■■□□□ 1.29
H3BM21 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.12■■□□□ 1.29
H3BM21 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.12■■□□□ 1.29
H3BM21 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
H3BM21 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
H3BM21 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
H3BM21 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
H3BM21 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.11■■□□□ 1.29
H3BM21 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
H3BM21 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
H3BM21 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.1■■□□□ 1.29
H3BM21 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
H3BM21 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.1■■□□□ 1.29
H3BM21 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
H3BM21 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
H3BM21 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
H3BM21 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
H3BM21 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
H3BM21 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.1■■□□□ 1.29
H3BM21 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.09■■□□□ 1.29
H3BM21 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
H3BM21 MIR6724-1-201ENST00000616420 92 ntBASIC23.09■■□□□ 1.29
H3BM21 MIR6724-2-201ENST00000616483 92 ntBASIC23.09■■□□□ 1.29
H3BM21 MIR6724-4-201ENST00000617390 92 ntBASIC23.09■■□□□ 1.29
H3BM21 MIR6724-3-201ENST00000622482 92 ntBASIC23.09■■□□□ 1.29
H3BM21 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
H3BM21 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
H3BM21 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.08■■□□□ 1.29
H3BM21 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
H3BM21 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
H3BM21 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
H3BM21 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
H3BM21 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
H3BM21 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.08■■□□□ 1.29
H3BM21 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.08■■□□□ 1.29
H3BM21 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.08■■□□□ 1.29
H3BM21 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.08■■□□□ 1.29
H3BM21 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.08■■□□□ 1.29
H3BM21 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.08■■□□□ 1.29
H3BM21 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
H3BM21 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
H3BM21 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.08■■□□□ 1.28
H3BM21 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
H3BM21 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
H3BM21 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.07■■□□□ 1.28
H3BM21 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
H3BM21 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
H3BM21 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
H3BM21 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
H3BM21 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
H3BM21 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
H3BM21 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
H3BM21 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.06■■□□□ 1.28
H3BM21 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.06■■□□□ 1.28
H3BM21 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.06■■□□□ 1.28
H3BM21 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
H3BM21 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
H3BM21 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
H3BM21 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
H3BM21 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.05■■□□□ 1.28
H3BM21 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.05■■□□□ 1.28
H3BM21 AL117332.1-201ENST00000622628 974 ntBASIC23.05■■□□□ 1.28
H3BM21 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
H3BM21 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
H3BM21 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
H3BM21 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
H3BM21 AC022211.4-201ENST00000625094 2161 ntBASIC23.04■■□□□ 1.28
H3BM21 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.04■■□□□ 1.28
H3BM21 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.04■■□□□ 1.28
H3BM21 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
H3BM21 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
H3BM21 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.04■■□□□ 1.28
H3BM21 AL356740.2-201ENST00000601559 647 ntBASIC23.04■■□□□ 1.28
H3BM21 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
H3BM21 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
H3BM21 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.04■■□□□ 1.28
H3BM21 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
H3BM21 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
H3BM21 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
H3BM21 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
H3BM21 AC090877.2-201ENST00000558441 1738 ntBASIC23.03■■□□□ 1.28
H3BM21 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
H3BM21 AF131216.4-201ENST00000638924 1588 ntBASIC23.03■■□□□ 1.28
H3BM21 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
H3BM21 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
H3BM21 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
H3BM21 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
H3BM21 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
H3BM21 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.03■■□□□ 1.28
H3BM21 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
H3BM21 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.03■■□□□ 1.28
H3BM21 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.03■■□□□ 1.28
H3BM21 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.03■■□□□ 1.28
H3BM21 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms