Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.55■■□□□ 1.04
TRBV11-1A0A0K0K1C0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRBV11-1A0A0K0K1C0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRBV11-1A0A0K0K1C0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRBV11-1A0A0K0K1C0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRBV11-1A0A0K0K1C0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
TRBV11-1A0A0K0K1C0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
TRBV11-1A0A0K0K1C0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV11-1A0A0K0K1C0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.54■■□□□ 1.04
TRBV11-1A0A0K0K1C0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.54■■□□□ 1.04
TRBV11-1A0A0K0K1C0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
TRBV11-1A0A0K0K1C0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRBV11-1A0A0K0K1C0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.54■■□□□ 1.04
TRBV11-1A0A0K0K1C0 AC022211.4-201ENST00000625094 2161 ntBASIC21.54■■□□□ 1.04
TRBV11-1A0A0K0K1C0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 MTDHP2-201ENST00000601468 714 ntBASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 AC131212.1-201ENST00000613771 668 ntBASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV11-1A0A0K0K1C0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.52■■□□□ 1.04
TRBV11-1A0A0K0K1C0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.52■■□□□ 1.03
TRBV11-1A0A0K0K1C0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.52■■□□□ 1.03
TRBV11-1A0A0K0K1C0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV11-1A0A0K0K1C0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV11-1A0A0K0K1C0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV11-1A0A0K0K1C0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV11-1A0A0K0K1C0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV11-1A0A0K0K1C0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.51■■□□□ 1.03
TRBV11-1A0A0K0K1C0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV11-1A0A0K0K1C0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 AC010997.5-201ENST00000609182 354 ntBASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV11-1A0A0K0K1C0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV11-1A0A0K0K1C0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRBV11-1A0A0K0K1C0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.49■■□□□ 1.03
TRBV11-1A0A0K0K1C0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRBV11-1A0A0K0K1C0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV11-1A0A0K0K1C0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV11-1A0A0K0K1C0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV11-1A0A0K0K1C0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV11-1A0A0K0K1C0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV11-1A0A0K0K1C0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 SNX5-217ENST00000606557 1087 ntBASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 AC020928.2-201ENST00000588717 2197 ntBASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV11-1A0A0K0K1C0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.46■■□□□ 1.03
TRBV11-1A0A0K0K1C0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms