Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 PKD1P6-201ENST00000343738 4769 ntBASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 AL139125.2-201ENST00000623134 1869 ntBASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 MIR6089-201ENST00000616698 64 ntBASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRGV4A0A0C4DH28 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV4A0A0C4DH28 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRGV4A0A0C4DH28 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRGV4A0A0C4DH28 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 LINC01124-201ENST00000409786 2117 ntBASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 ATP5G2P3-201ENST00000429083 425 ntBASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRGV4A0A0C4DH28 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 AC004987.1-201ENST00000428627 508 ntBASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 AC012354.3-201ENST00000623734 483 ntBASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV4A0A0C4DH28 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 TSPY13P-201ENST00000338964 914 ntBASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV4A0A0C4DH28 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 LONRF2P2-201ENST00000439212 571 ntBASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV4A0A0C4DH28 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TRGV4A0A0C4DH28 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV4A0A0C4DH28 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV4A0A0C4DH28 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV4A0A0C4DH28 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.53■□□□□ 0.24
TRGV4A0A0C4DH28 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV4A0A0C4DH28 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV4A0A0C4DH28 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV4A0A0C4DH28 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.52■□□□□ 0.24
TRGV4A0A0C4DH28 AC074183.2-201ENST00000623112 922 ntBASIC16.52■□□□□ 0.24
TRGV4A0A0C4DH28 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms