Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV25A0A0B4J276 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 AF131216.4-201ENST00000638924 1588 ntBASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 MIR4787-201ENST00000607364 84 ntBASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV25A0A0B4J276 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 AL161729.1-201ENST00000604104 1402 ntBASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV25A0A0B4J276 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 AC020928.2-201ENST00000588717 2197 ntBASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV25A0A0B4J276 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV25A0A0B4J276 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV25A0A0B4J276 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV25A0A0B4J276 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV25A0A0B4J276 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV25A0A0B4J276 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV25A0A0B4J276 AC092028.1-203ENST00000608262 953 ntBASIC17.41■□□□□ 0.38
TRAV25A0A0B4J276 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV25A0A0B4J276 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV25A0A0B4J276 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV25A0A0B4J276 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 GUSBP5-201ENST00000418136 578 ntBASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 AL022069.1-201ENST00000568025 1636 ntBASIC17.39■□□□□ 0.37
TRAV25A0A0B4J276 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV25A0A0B4J276 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV25A0A0B4J276 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms