Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 LONRF2P2-201ENST00000439212 571 ntBASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV24A0A0B4J272 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 ABHD17AP5-201ENST00000580133 923 ntBASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV24A0A0B4J272 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV24A0A0B4J272 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV24A0A0B4J272 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRAV24A0A0B4J272 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV24A0A0B4J272 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV24A0A0B4J272 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV24A0A0B4J272 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV24A0A0B4J272 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRAV24A0A0B4J272 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV24A0A0B4J272 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV24A0A0B4J272 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV24A0A0B4J272 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.45■□□□□ 0.7
TRAV24A0A0B4J272 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV24A0A0B4J272 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV24A0A0B4J272 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
TRAV24A0A0B4J272 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRAV24A0A0B4J272 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV24A0A0B4J272 NTF6A-201ENST00000591175 560 ntBASIC19.44■□□□□ 0.7
TRAV24A0A0B4J272 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV24A0A0B4J272 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
TRAV24A0A0B4J272 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV24A0A0B4J272 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV24A0A0B4J272 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
TRAV24A0A0B4J272 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV24A0A0B4J272 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TRAV24A0A0B4J272 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRAV24A0A0B4J272 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV24A0A0B4J272 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV24A0A0B4J272 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV24A0A0B4J272 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 DUX4L18-201ENST00000553347 1267 ntBASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV24A0A0B4J272 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRAV24A0A0B4J272 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV24A0A0B4J272 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.39■□□□□ 0.7
TRAV24A0A0B4J272 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV24A0A0B4J272 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV24A0A0B4J272 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV24A0A0B4J272 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV24A0A0B4J272 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
TRAV24A0A0B4J272 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TRAV24A0A0B4J272 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV24A0A0B4J272 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV24A0A0B4J272 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV24A0A0B4J272 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV24A0A0B4J272 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV24A0A0B4J272 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms