Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AC006486.2-201ENST00000624246 2199 ntBASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC011495.1-201ENST00000498085 584 ntBASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC092552.1-201ENST00000547243 906 ntBASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 WFDC1-204ENST00000613603 549 ntBASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC138035.3-201ENST00000622706 2791 ntBASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL4A3BPQ9Y5P4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 FAM86LP-201ENST00000478302 853 ntBASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 IGHV3-72-202ENST00000621503 303 ntBASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 AC112693.3-201ENST00000624819 1983 ntBASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.36■□□□□ 0.37
COL4A3BPQ9Y5P4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms