Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 BCRP6-201ENST00000510112 632 ntBASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 BCRP7-201ENST00000511549 544 ntBASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AP005117.1-202ENST00000581724 1908 ntBASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC245100.3-201ENST00000441281 285 ntBASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 SLED1-202ENST00000512051 380 ntBASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC120045.2-201ENST00000567334 178 ntBASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC020907.1-201ENST00000616460 1350 ntBASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 AC073347.1-201ENST00000421633 2643 ntBASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDHGA9Q9Y5G4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 C1QBPP1-201ENST00000400117 770 ntBASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 BAATP1-201ENST00000412284 1225 ntBASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHGA9Q9Y5G4 AC007551.1-201ENST00000457394 519 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms