Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TPRKBQ9Y3C4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TPRKBQ9Y3C4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TPRKBQ9Y3C4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TPRKBQ9Y3C4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TPRKBQ9Y3C4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 MRPL20P1-201ENST00000400819 433 ntBASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 SCARNA2-201ENST00000458748 420 ntBASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AC011467.4-201ENST00000594891 528 ntBASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AL450472.2-201ENST00000603663 1156 ntBASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AC116407.4-201ENST00000623319 1061 ntBASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 DMBT1P1-203ENST00000636837 4628 ntBASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 AC152010.1-201ENST00000415779 2006 ntBASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TPRKBQ9Y3C4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 AL031595.1-201ENST00000623969 4709 ntBASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 AL031133.1-201ENST00000406807 723 ntBASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 IGHV3-65-201ENST00000523210 341 ntBASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 MIR3180-1-201ENST00000580374 94 ntBASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 MIR3180-3-201ENST00000584616 94 ntBASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.23□□□□□ -0.13
TPRKBQ9Y3C4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms