Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 FAM21FP-201ENST00000426241 1131 ntBASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 CU634019.7-201ENST00000624153 1185 ntBASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 FP236241.2-201ENST00000624906 1185 ntBASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 CYP4F24P-201ENST00000586049 1580 ntBASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDZRN3Q9UPQ7 AC090616.6-203ENST00000579186 1945 ntBASIC20.02■□□□□ 0.79
PDZRN3Q9UPQ7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.02■□□□□ 0.79
PDZRN3Q9UPQ7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.02■□□□□ 0.79
PDZRN3Q9UPQ7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.02■□□□□ 0.79
PDZRN3Q9UPQ7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 AC006486.2-201ENST00000624246 2199 ntBASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 AC005229.1-201ENST00000392885 409 ntBASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 BRWD1P1-201ENST00000401091 371 ntBASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 CSF2RBP1-201ENST00000447905 391 ntBASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN3Q9UPQ7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 AC099336.1-201ENST00000417053 1171 ntBASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 RPL7P3-201ENST00000441388 714 ntBASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 AL109954.1-202ENST00000564051 2148 ntBASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDZRN3Q9UPQ7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AC023157.3-201ENST00000619086 2088 ntBASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 BCYRN1-201ENST00000418539 200 ntBASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms