Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 PAUPAR-201ENST00000630360 2965 ntBASIC17.41■□□□□ 0.38
COL20A1Q9P218 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.41■□□□□ 0.38
COL20A1Q9P218 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL20A1Q9P218 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 MIR4525-201ENST00000580000 75 ntBASIC17.4■□□□□ 0.38
COL20A1Q9P218 AC004466.1-201ENST00000599515 1080 ntBASIC17.4■□□□□ 0.38
COL20A1Q9P218 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 AHCYP2-201ENST00000430630 1300 ntBASIC17.4■□□□□ 0.38
COL20A1Q9P218 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.4■□□□□ 0.38
COL20A1Q9P218 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL20A1Q9P218 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL20A1Q9P218 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
COL20A1Q9P218 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL20A1Q9P218 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
COL20A1Q9P218 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 FAM86HP-204ENST00000513466 959 ntBASIC17.39■□□□□ 0.37
COL20A1Q9P218 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 RN7SL560P-201ENST00000577943 264 ntBASIC17.39■□□□□ 0.37
COL20A1Q9P218 RN7SL219P-201ENST00000582872 296 ntBASIC17.39■□□□□ 0.37
COL20A1Q9P218 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 ENPP7P14-201ENST00000621765 1040 ntBASIC17.39■□□□□ 0.37
COL20A1Q9P218 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
COL20A1Q9P218 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL20A1Q9P218 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 GOLGA2P4-201ENST00000441462 777 ntBASIC17.38■□□□□ 0.37
COL20A1Q9P218 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 AP003171.2-201ENST00000528208 925 ntBASIC17.38■□□□□ 0.37
COL20A1Q9P218 AC023310.1-201ENST00000554836 735 ntBASIC17.38■□□□□ 0.37
COL20A1Q9P218 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 MIR4741-201ENST00000579822 90 ntBASIC17.38■□□□□ 0.37
COL20A1Q9P218 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL20A1Q9P218 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.38■□□□□ 0.37
COL20A1Q9P218 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms