Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 KRT8P22-201ENST00000562317 1415 ntBASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 RN7SL399P-201ENST00000471648 279 ntBASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 MIR5189-201ENST00000577370 114 ntBASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 CU634019.7-201ENST00000624153 1185 ntBASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 FP236241.2-201ENST00000624906 1185 ntBASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ARHGEF3Q9NR81 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 FAM21FP-201ENST00000426241 1131 ntBASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 RNA5SP412-201ENST00000516234 123 ntBASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 AC103810.3-201ENST00000583567 96 ntBASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 AC244093.1-201ENST00000610837 814 ntBASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 AL512652.2-201ENST00000625156 1716 ntBASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ARHGEF3Q9NR81 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 AC023908.3-201ENST00000564211 3047 ntBASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 AL442647.2-201ENST00000429864 857 ntBASIC16.46■□□□□ 0.23
ARHGEF3Q9NR81 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms