Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 PAUPAR-201ENST00000630360 2965 ntBASIC13.66□□□□□ -0.22
CDH20Q9HBT6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 OR2I1P-210ENST00000642037 4691 ntBASIC13.66□□□□□ -0.22
CDH20Q9HBT6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.66□□□□□ -0.22
CDH20Q9HBT6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC092384.3-202ENST00000564646 2873 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 CICP13-201ENST00000422015 2789 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 MRPS18AP1-201ENST00000414458 589 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 HMGN1P19-201ENST00000436976 333 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC104794.3-201ENST00000566840 1248 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC004233.3-201ENST00000607794 1269 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 AC004840.1-201ENST00000636359 365 ntBASIC13.65□□□□□ -0.22
CDH20Q9HBT6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDH20Q9HBT6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
CDH20Q9HBT6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
CDH20Q9HBT6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.65□□□□□ -0.23
CDH20Q9HBT6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH20Q9HBT6 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms