Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 SPDYE7P-202ENST00000420373 878 ntBASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 UPF3AP3-201ENST00000420996 769 ntBASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRTM1Q9HBL6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 RPSAP43-201ENST00000402237 625 ntBASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 AL589739.1-201ENST00000607720 493 ntBASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 AP001059.3-201ENST00000619053 235 ntBASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 MIR6069-201ENST00000620069 79 ntBASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRTM1Q9HBL6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms