Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 FAM58BP-201ENST00000439056 645 ntBASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 IGHV3-37-201ENST00000518544 340 ntBASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 RBM8B-201ENST00000555532 525 ntBASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 SAMD11P1-201ENST00000571429 661 ntBASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 AC002472.3-201ENST00000640124 621 ntBASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 AP000593.2-201ENST00000542775 1433 ntBASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.78■□□□□ 0.28
C11orf49Q9H6J7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 AC006449.6-201ENST00000612330 2296 ntBASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 HLA-J-204ENST00000495278 958 ntBASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 DUX4L46-201ENST00000566845 751 ntBASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 AC008805.1-201ENST00000590892 364 ntBASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 AC138894.2-201ENST00000602838 371 ntBASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.77■□□□□ 0.28
C11orf49Q9H6J7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf49Q9H6J7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf49Q9H6J7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf49Q9H6J7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf49Q9H6J7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf49Q9H6J7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
C11orf49Q9H6J7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf49Q9H6J7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf49Q9H6J7 AC106886.4-201ENST00000623557 2502 ntBASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 SHC1P1-201ENST00000425230 1745 ntBASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 AC239868.1-201ENST00000369385 493 ntBASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 OR2K2-202ENST00000374428 1038 ntBASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 PIN4P1-201ENST00000451079 396 ntBASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 RN7SL258P-201ENST00000478664 300 ntBASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 RN7SL67P-201ENST00000492147 296 ntBASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 E2F3P2-201ENST00000447755 1422 ntBASIC16.76■□□□□ 0.27
C11orf49Q9H6J7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms