Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AC084364.1-201ENST00000551967 1556 ntBASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AC073508.3-201ENST00000619697 1419 ntBASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 DRAXINP1-201ENST00000437611 948 ntBASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AL671277.2-201ENST00000458060 996 ntBASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AL450472.2-201ENST00000603663 1156 ntBASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AC114271.1-201ENST00000612689 2813 ntBASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 TPSP2-201ENST00000561760 610 ntBASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SLIRPQ9GZT3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms