Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNTNAP4Q9C0A0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 AD000864.1-201ENST00000624076 2295 ntBASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 INE2-201ENST00000630399 1874 ntBASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 AC011840.2-201ENST00000563063 1520 ntBASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 FGFR3P1-201ENST00000449999 601 ntBASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 RN7SL181P-201ENST00000462921 277 ntBASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 AC090857.1-201ENST00000527400 390 ntBASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 AC103691.2-201ENST00000618824 433 ntBASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 NAP1L6-202ENST00000641404 1222 ntBASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP4Q9C0A0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 MST1L-201ENST00000442552 2185 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 AL157414.3-201ENST00000624276 1954 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 AC098935.1-201ENST00000446057 611 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 AC073150.1-201ENST00000450406 1084 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 NOC2LP1-201ENST00000450578 752 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 NPM1P43-201ENST00000558669 786 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 MIR4750-201ENST00000584564 56 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 AC011491.1-203ENST00000637688 543 ntBASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP4Q9C0A0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP4Q9C0A0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms