Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 AC148477.4-201ENST00000613430 1793 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 AC132872.4-202ENST00000622924 2756 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 AC114812.1-204ENST00000449669 728 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 ZNF767P-206ENST00000513792 565 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 RN7SL560P-201ENST00000577943 264 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 AC024909.3-201ENST00000611513 2257 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC3Q9BY71 KRT8P44-201ENST00000441609 1350 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 AC020907.1-201ENST00000616460 1350 ntBASIC16.13■□□□□ 0.17
LRRC3Q9BY71 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 AL365203.3-201ENST00000609742 2057 ntBASIC16.12■□□□□ 0.17
LRRC3Q9BY71 AC105917.1-201ENST00000506637 2539 ntBASIC16.12■□□□□ 0.17
LRRC3Q9BY71 AC011270.2-201ENST00000624293 2550 ntBASIC16.12■□□□□ 0.17
LRRC3Q9BY71 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 FAM86HP-204ENST00000513466 959 ntBASIC16.12■□□□□ 0.17
LRRC3Q9BY71 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 AC023310.1-201ENST00000554836 735 ntBASIC16.12■□□□□ 0.17
LRRC3Q9BY71 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms