Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 KLF2P3-201ENST00000451977 1087 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AC009477.1-201ENST00000452936 217 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 KRT18P43-201ENST00000469825 1281 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 RN7SL618P-201ENST00000477850 296 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 GAPDHP40-201ENST00000505218 1006 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 SDHAP3-202ENST00000515467 728 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AC140878.1-201ENST00000565277 250 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AC100757.3-201ENST00000622361 1406 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AL157414.3-201ENST00000624276 1954 ntBASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AC018442.1-201ENST00000421439 2061 ntBASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AC012508.2-201ENST00000567613 1472 ntBASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TREML5P-201ENST00000421694 576 ntBASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AC114501.2-201ENST00000439631 535 ntBASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 AP001160.2-201ENST00000596071 487 ntBASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RSPO3Q9BXY4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO3Q9BXY4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.21□□□□□ -0.14
RSPO3Q9BXY4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO3Q9BXY4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.21□□□□□ -0.14
RSPO3Q9BXY4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
RSPO3Q9BXY4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO3Q9BXY4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RSPO3Q9BXY4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms