Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHRDL1Q9BU40 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 BNIP3P1-202ENST00000550043 1585 ntBASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 RPSAP43-201ENST00000402237 625 ntBASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 AC004461.1-201ENST00000412461 403 ntBASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 AL136982.4-201ENST00000437689 1740 ntBASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 DMBT1P1-203ENST00000636837 4628 ntBASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 AC018892.3-201ENST00000623986 2499 ntBASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.44□□□□□ -0.42
CHRDL1Q9BU40 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
CHRDL1Q9BU40 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms