Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 CICP11-201ENST00000434745 2827 ntBASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SHANK2-AS3Q9BTD1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 GHSR-202ENST00000427970 912 ntBASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 HTR5BP-201ENST00000430851 1154 ntBASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC005237.2-201ENST00000434368 219 ntBASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 HIST3H2BA-201ENST00000436555 524 ntBASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 BANF1P1-201ENST00000553684 263 ntBASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC018529.1-201ENST00000613063 361 ntBASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12□□□□□ -0.49
SHANK2-AS3Q9BTD1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC067750.1-201ENST00000608826 6545 ntBASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC026748.1-201ENST00000624349 3251 ntBASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 MIR940-201ENST00000401276 94 ntBASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 MTDHP5-201ENST00000598980 586 ntBASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.99□□□□□ -0.49
SHANK2-AS3Q9BTD1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms