Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC138035.3-201ENST00000622706 2791 ntBASIC10.91□□□□□ -0.66
UPK3BQ9BT76 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UPK3BQ9BT76 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 CYP2T1P-202ENST00000641596 2535 ntBASIC10.9□□□□□ -0.66
UPK3BQ9BT76 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AC092171.3-201ENST00000610122 2651 ntBASIC10.9□□□□□ -0.66
UPK3BQ9BT76 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AC126335.2-201ENST00000623362 4637 ntBASIC10.9□□□□□ -0.66
UPK3BQ9BT76 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AC015922.1-201ENST00000421102 1152 ntBASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AC140912.1-201ENST00000577171 1054 ntBASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UPK3BQ9BT76 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
UPK3BQ9BT76 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
UPK3BQ9BT76 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
UPK3BQ9BT76 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC10.9□□□□□ -0.67
UPK3BQ9BT76 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
UPK3BQ9BT76 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
UPK3BQ9BT76 AC011477.6-201ENST00000604980 1927 ntBASIC10.9□□□□□ -0.67
UPK3BQ9BT76 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
UPK3BQ9BT76 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 AC007541.1-201ENST00000570282 1469 ntBASIC10.89□□□□□ -0.67
UPK3BQ9BT76 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.89□□□□□ -0.67
UPK3BQ9BT76 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms