Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK1Q99986 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VRK1Q99986 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VRK1Q99986 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.19
VRK1Q99986 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
VRK1Q99986 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
VRK1Q99986 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.83□□□□□ -0.19
VRK1Q99986 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.83□□□□□ -0.2
VRK1Q99986 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
VRK1Q99986 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 U82695.1-201ENST00000635752 1889 ntBASIC13.83□□□□□ -0.2
VRK1Q99986 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VRK1Q99986 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.83□□□□□ -0.2
VRK1Q99986 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.83□□□□□ -0.2
VRK1Q99986 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 POU5F1P6-201ENST00000466990 990 ntBASIC13.83□□□□□ -0.2
VRK1Q99986 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.83□□□□□ -0.2
VRK1Q99986 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.83□□□□□ -0.2
VRK1Q99986 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.83□□□□□ -0.2
VRK1Q99986 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
VRK1Q99986 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.83□□□□□ -0.2
VRK1Q99986 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
VRK1Q99986 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.83□□□□□ -0.2
VRK1Q99986 AC004233.3-201ENST00000607794 1269 ntBASIC13.83□□□□□ -0.2
VRK1Q99986 TEX28P1-201ENST00000613479 1221 ntBASIC13.83□□□□□ -0.2
VRK1Q99986 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.83□□□□□ -0.2
VRK1Q99986 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.83□□□□□ -0.2
VRK1Q99986 TEX28P2-201ENST00000617764 1221 ntBASIC13.83□□□□□ -0.2
VRK1Q99986 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.83□□□□□ -0.2
VRK1Q99986 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.83□□□□□ -0.2
VRK1Q99986 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
VRK1Q99986 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.83□□□□□ -0.2
VRK1Q99986 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK1Q99986 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK1Q99986 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 AL359258.3-201ENST00000622910 2331 ntBASIC13.82□□□□□ -0.2
VRK1Q99986 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.82□□□□□ -0.2
VRK1Q99986 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 MIR661-201ENST00000384842 89 ntBASIC13.82□□□□□ -0.2
VRK1Q99986 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 RPL37AP1-201ENST00000412502 279 ntBASIC13.82□□□□□ -0.2
VRK1Q99986 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.82□□□□□ -0.2
VRK1Q99986 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.82□□□□□ -0.2
VRK1Q99986 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.82□□□□□ -0.2
VRK1Q99986 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.82□□□□□ -0.2
VRK1Q99986 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.82□□□□□ -0.2
VRK1Q99986 AL079307.3-201ENST00000556114 283 ntBASIC13.82□□□□□ -0.2
VRK1Q99986 AC009118.2-201ENST00000613275 655 ntBASIC13.82□□□□□ -0.2
VRK1Q99986 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VRK1Q99986 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK1Q99986 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
VRK1Q99986 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms