Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 AC138649.2-201ENST00000615886 705 ntBASIC16.6■□□□□ 0.25
YME1L1Q96TA2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
YME1L1Q96TA2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 AC079328.2-201ENST00000561241 3354 ntBASIC16.59■□□□□ 0.25
YME1L1Q96TA2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.59■□□□□ 0.25
YME1L1Q96TA2 FAM8A4P-201ENST00000435433 1213 ntBASIC16.59■□□□□ 0.25
YME1L1Q96TA2 RN7SL769P-201ENST00000469386 295 ntBASIC16.59■□□□□ 0.25
YME1L1Q96TA2 COX5BP1-201ENST00000507622 393 ntBASIC16.59■□□□□ 0.25
YME1L1Q96TA2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
YME1L1Q96TA2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
YME1L1Q96TA2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 MIR769-201ENST00000390225 118 ntBASIC16.58■□□□□ 0.24
YME1L1Q96TA2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 HINT2P1-201ENST00000419438 481 ntBASIC16.58■□□□□ 0.24
YME1L1Q96TA2 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.58■□□□□ 0.24
YME1L1Q96TA2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 MIR3619-201ENST00000579667 83 ntBASIC16.58■□□□□ 0.24
YME1L1Q96TA2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
YME1L1Q96TA2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.57■□□□□ 0.24
YME1L1Q96TA2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms